Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045402 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 3.3e-44 181.4 96 100.0
CSS0031745 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.0e-42 176.4 96 97.9
CSS0038484 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 2.0e-41 172.2 96 94.8
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.3e-29 132.9 108 72.2
CSS0017240 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.1e-28 129.8 96 76.0
CSS0002641 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 3.3e-28 128.3 96 75.0
CSS0010685 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 6.2e-27 124.0 96 74.0
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 1.2e-19 99.8 117 52.1
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 7.8e-14 80.5 113 49.6
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 2.8e-11 72.0 112 47.3
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 2.8e-11 72.0 61 68.9
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 9.9e-09 63.5 112 41.1
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 1.7e-08 62.8 122 41.0
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 2.9e-08 62.0 112 40.2
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 3.8e-08 61.6 118 39.8
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 8.4e-08 60.5 110 38.2
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 3.2e-07 58.5 112 39.3
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 4.2e-07 58.2 118 37.3
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 5.4e-07 57.8 82 46.3
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 6.0e-06 54.3 118 36.4
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 6.0e-06 54.3 63 47.6


User provided reference genes

Program Settings