Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.1e-69 266.5 142 100.0
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 5.3e-27 124.8 137 52.6
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 8.0e-23 110.9 117 56.4
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.8e-22 109.8 129 51.9
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 2.4e-19 99.4 120 52.5
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 1.6e-18 96.7 136 50.7
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 2.7e-18 95.9 99 52.5
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 2.7e-18 95.9 116 49.1
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 1.0e-17 94.0 123 48.0
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 1.3e-17 93.6 145 43.4
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 2.3e-17 92.8 126 47.6
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 2.9e-17 92.4 99 53.5
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 5.0e-17 91.7 117 51.3
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 5.0e-17 91.7 142 50.7
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 6.5e-17 91.3 145 42.1
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 6.5e-17 91.3 141 41.1
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 8.6e-17 90.9 135 48.9
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 8.6e-17 90.9 127 48.8
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 8.6e-17 90.9 133 44.4
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 8.6e-17 90.9 132 44.7
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 8.6e-17 90.9 138 39.9
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 1.1e-16 90.5 144 46.5
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.5e-16 90.1 142 41.5
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 1.9e-16 89.7 117 43.6
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 3.3e-16 89.0 134 43.3
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 5.5e-16 88.2 120 46.7
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.5e-16 88.2 133 45.9
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 5.5e-16 88.2 142 41.5
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 7.2e-16 87.8 116 48.3
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 9.5e-16 87.4 131 46.6
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.2e-15 87.0 126 46.8
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 1.6e-15 86.7 134 46.3
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 2.1e-15 86.3 65 67.7
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.6e-15 85.5 132 42.4
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 4.7e-15 85.1 99 52.5
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 4.7e-15 85.1 142 43.0
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 4.7e-15 85.1 127 46.5
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 8.0e-15 84.3 133 42.9
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 1.4e-14 83.6 106 48.1
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.8e-14 83.2 118 44.9
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 2.3e-14 82.8 108 46.3
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 4.0e-14 82.0 123 44.7
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 4.0e-14 82.0 97 47.4
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 4.0e-14 82.0 133 38.3
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 8.9e-14 80.9 106 52.8
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 1.5e-13 80.1 105 48.6
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 2.0e-13 79.7 154 37.0
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 3.4e-13 79.0 150 41.3
Rhsim12G0044500 Rhododendron simsii HOM05D007558 ORTHO05D009245 3.4e-13 79.0 141 41.8
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 5.7e-13 78.2 127 43.3
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 7.5e-13 77.8 126 44.4
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 7.5e-13 77.8 139 44.6
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 9.8e-13 77.4 139 40.3
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 9.8e-13 77.4 128 43.0
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.3e-12 77.0 128 43.0
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 2.2e-12 76.3 139 42.4
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-12 75.9 143 41.3
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-12 75.9 143 41.3
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 2.8e-12 75.9 138 43.5
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.7e-12 75.5 139 47.5
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 6.3e-12 74.7 134 41.0
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 6.3e-12 74.7 104 47.1
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 8.3e-12 74.3 99 47.5
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.1e-11 73.9 100 47.0
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 1.4e-11 73.6 150 36.7
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 5.4e-11 71.6 115 47.0
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 9.2e-11 70.9 116 42.2
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 9.2e-11 70.9 109 43.1
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.6e-10 70.1 84 47.6
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 2.0e-10 69.7 109 45.9
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 2.0e-10 69.7 142 38.0
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 2.7e-10 69.3 140 39.3
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 7.8e-10 67.8 84 51.2
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 1.3e-09 67.0 127 45.7
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 1.3e-09 67.0 143 40.6
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.7e-09 66.6 113 41.6
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.8e-09 65.5 117 44.4
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 3.8e-09 65.5 145 40.0
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 3.8e-09 65.5 133 42.1
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 5.0e-09 65.1 143 41.3
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 6.6e-09 64.7 121 40.5
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 6.6e-09 64.7 109 42.2
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 6.6e-09 64.7 126 41.3
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 6.6e-09 64.7 106 48.1
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 1.5e-08 63.5 62 58.1
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 1.5e-08 63.5 128 39.8
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.9e-08 63.2 117 43.6
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 2.5e-08 62.8 53 56.6
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 3.3e-08 62.4 139 34.5
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 3.3e-08 62.4 146 37.0
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 7.3e-08 61.2 115 39.1
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 1.6e-07 60.1 105 40.0
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 2.8e-07 59.3 157 38.9
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 2.8e-07 59.3 146 37.0
Sed0023819 Sechium edule HOM05D007558 ORTHO05D009245 6.1e-07 58.2 122 37.7
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 1.0e-06 57.4 96 38.5
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.4e-06 57.0 115 35.7
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 2.3e-06 56.2 64 46.9
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 3.0e-06 55.8 130 32.3
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.0e-06 55.8 60 55.0
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 5.2e-06 55.1 125 32.0
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 8.9e-06 54.3 96 39.6


User provided reference genes

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