Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.8e-44 182.2 89 100.0
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.7e-36 153.7 79 96.2
CSS0049548 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.7e-36 153.7 85 89.4
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.3e-35 151.4 79 94.9
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.3e-35 151.4 79 94.9
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.3e-35 151.4 79 94.9
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 4.4e-35 151.0 79 94.9
CSS0015949 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.7e-34 149.1 79 93.7
CSS0038432 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 7.2e-30 133.7 79 82.3
CSS0003527 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D109064 7.0e-25 117.1 79 74.7
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.8e-18 94.4 69 69.6
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 5.2e-12 74.3 70 55.7
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.2e-11 73.2 70 54.3
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.0e-11 72.4 70 54.3
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 9.8e-11 70.1 70 52.9
CSS0030614 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.4e-09 66.2 70 51.4
CSS0033294 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 7.0e-09 63.9 70 50.0
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.0e-09 63.9 72 47.2
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.9e-08 60.8 72 47.2
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.0e-07 57.8 51 52.9
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.6e-07 57.4 72 44.4
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-06 56.2 51 52.9
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-06 56.2 60 43.3
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.6e-06 54.3 60 46.7
MELO3C028799.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.3e-06 53.9 58 43.1
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 9.5e-06 53.5 69 40.6
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.5e-06 53.5 72 40.3
Dinv04254 Davidia involucrata HOM05D008892 ORTHO05D010661 9.5e-06 53.5 65 35.4
Dinv09482 Davidia involucrata HOM05D008892 ORTHO05D010661 9.5e-06 53.5 65 35.4
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.5e-06 53.5 65 50.8


User provided reference genes

Program Settings