Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045333 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.6e-82 309.7 191 100.0
CSS0021977 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 9.6e-48 194.1 185 71.4
Actinidia11835 Actinidia chinensis HOM05D003506 ORTHO05D004063 5.0e-44 181.8 185 69.7
CSS0044487 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 4.2e-43 178.7 185 69.2
Actinidia11819 Actinidia chinensis HOM05D003506 ORTHO05D004063 9.7e-40 167.5 165 52.7
Dinv40460 Davidia involucrata HOM05D003506 ORTHO05D004063 2.7e-34 149.4 186 61.3
CSS0002170 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 8.2e-31 137.9 185 62.2
Rhsim03G0013200 Rhododendron simsii HOM05D003506 ORTHO05D004063 5.7e-24 115.2 187 57.8
Rhsim03G0013500 Rhododendron simsii HOM05D003506 ORTHO05D004063 4.8e-23 112.1 187 57.2
Rhsim03G0013700 Rhododendron simsii HOM05D003506 ORTHO05D004063 1.8e-22 110.2 187 56.7
Rhsim03G0012900 Rhododendron simsii HOM05D003506 ORTHO05D004063 2.0e-21 106.7 187 55.1
Actinidia20129 Actinidia chinensis HOM05D003506 ORTHO05D004063 4.5e-21 105.5 189 52.9
DCAR_013527 Daucus carota HOM05D003506 ORTHO05D004063 4.0e-17 92.4 188 52.1
Cc02_g12230 Coffea canephora HOM05D003506 ORTHO05D004063 3.3e-16 89.4 187 50.3
Lj2C372T7 Lonicera japonica HOM05D003506 ORTHO05D004063 1.7e-15 87.0 185 50.3
Hma1.2p1_2475F.1_g322790 Hydrangea macrophylla HOM05D003506 ORTHO05D004063 6.3e-15 85.1 186 50.5
Cc08_g04830 Coffea canephora HOM05D003506 ORTHO05D004063 2.7e-13 79.7 183 47.5
RhsimUnG0207500 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.5e-13 79.3 189 47.1
Cc08_g04930 Coffea canephora HOM05D003506 ORTHO05D004063 3.2e-11 72.8 183 45.9
CAN.G641.64 Capsicum annuum HOM05D003506 ORTHO05D004063 4.2e-11 72.4 179 39.7
Prupe.7G078000 Prunus persica HOM05D003506 ORTHO05D004063 4.2e-11 72.4 196 45.9
QL12p010090 Quercus lobata HOM05D003506 ORTHO05D004063 2.1e-10 70.1 203 40.4
Lj1A1215T59 Lonicera japonica HOM05D003506 ORTHO05D004063 1.4e-09 67.4 99 42.4
MD14G1055300 Malus domestica HOM05D003506 ORTHO05D004063 8.8e-09 64.7 191 44.5
CAN.G641.75 Capsicum annuum HOM05D003506 ORTHO05D004063 1.2e-08 64.3 185 30.3
QL12p009886 Quercus lobata HOM05D003506 ORTHO05D004063 5.7e-08 62.0 199 42.7
QL12p010549 Quercus lobata HOM05D003506 ORTHO05D004063 5.7e-08 62.0 199 42.7
Lsat_1_v5_gn_1_123181 Lactuca sativa HOM05D003506 ORTHO05D004063 2.8e-07 59.7 170 45.3
Eucgr.E00383 Eucalyptus grandis HOM05D003506 ORTHO05D004063 3.7e-07 59.3 197 40.1
Actinidia26982 Actinidia chinensis HOM05D003506 ORTHO05D004063 4.8e-07 58.9 93 41.9
Cc05_g09100 Coffea canephora HOM05D003506 ORTHO05D004063 4.1e-06 55.8 105 36.2
QL12p009920 Quercus lobata HOM05D003506 ORTHO05D004063 4.1e-06 55.8 204 38.2
CANSAT56G2852 Cannabis sativa HOM05D003506 ORTHO05D004063 5.4e-06 55.5 196 41.8
FAN14G0755 Fragaria x ananassa HOM05D003506 ORTHO05D004063 7.0e-06 55.1 192 42.7


User provided reference genes

Program Settings