Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.2e-191 672.2 340 100.0
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 6.9e-190 667.2 340 99.1
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.2e-162 576.6 340 87.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 9.4e-155 550.4 339 82.0
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 7.0e-150 534.3 346 80.9
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.0e-144 516.2 337 78.9
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.4e-144 515.4 325 79.4
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.8e-143 512.3 338 77.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 6.3e-143 511.1 341 75.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.8e-142 509.6 323 81.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.2e-142 508.8 336 76.8
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.2e-142 508.8 336 76.8
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.0e-142 507.7 336 76.5
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 5.9e-141 504.6 330 77.9
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 7.8e-141 504.2 335 76.1
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.3e-140 502.7 328 78.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 5.0e-140 501.5 328 76.5
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.0e-140 501.5 336 76.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.9e-139 499.6 340 73.5
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.6e-138 496.5 323 78.3
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.6e-138 496.5 336 75.6
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.1e-138 496.1 329 77.2
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 6.1e-138 494.6 340 75.6
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.4e-137 493.4 325 78.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 4.0e-137 491.9 321 76.6
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 8.9e-137 490.7 340 75.6
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.2e-136 490.3 326 75.2
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.2e-136 490.3 342 73.7
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 1.5e-136 490.0 321 76.3
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 7.5e-136 487.6 330 74.2
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 2.2e-135 486.1 323 74.3
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.9e-135 485.7 327 76.5
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 2.9e-135 485.7 334 73.4
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 4.9e-135 485.0 328 76.8
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 6.4e-135 484.6 320 76.6
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 6.4e-135 484.6 341 73.3
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 2.4e-134 482.6 336 74.7
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 4.1e-134 481.9 324 74.4
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 4.1e-134 481.9 340 70.9
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 7.0e-134 481.1 323 73.7
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 9.2e-134 480.7 323 74.0
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 2.0e-133 479.6 330 73.9
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 6.0e-133 478.0 339 72.0
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.0e-132 477.2 338 71.6
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.3e-132 476.9 325 72.9
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.7e-132 476.5 334 74.9
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 8.6e-132 474.2 340 72.1
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.5e-131 473.4 330 73.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.5e-131 472.6 323 72.4
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.5e-131 472.6 335 74.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 3.3e-131 472.2 311 76.2
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.3e-131 472.2 332 72.0
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 5.6e-131 471.5 323 72.1
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.2e-130 470.3 321 74.5
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 4.7e-130 468.4 323 74.3
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 2.3e-129 466.1 320 72.2
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.3e-129 466.1 340 70.6
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.3e-129 466.1 323 73.1
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 4.0e-129 465.3 323 71.5
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 5.2e-129 464.9 337 70.6
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 8.9e-129 464.2 328 72.6
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.2e-128 463.8 338 70.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.0e-128 463.0 323 71.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.0e-128 463.0 337 71.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 3.4e-128 462.2 323 71.5
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 4.4e-128 461.8 325 71.7
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 7.5e-128 461.1 432 60.2
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 9.8e-128 460.7 323 70.9
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 2.2e-127 459.5 318 72.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.7e-127 458.8 337 69.4
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 3.7e-127 458.8 319 72.7
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 4.9e-127 458.4 323 72.1
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.1e-126 457.2 313 73.5
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 9.2e-126 454.1 340 69.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.9e-123 446.4 321 70.4
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 2.3e-121 439.5 327 70.9
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 5.2e-121 438.3 327 69.1
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.6e-120 434.5 317 70.3
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.4e-118 430.3 280 76.8
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 7.8e-117 424.5 340 67.1
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.0e-116 422.5 323 67.8
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.2e-114 417.2 280 73.9
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 5.2e-113 411.8 316 67.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 4.9e-111 405.2 271 76.0
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 9.3e-110 401.0 337 62.3
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 4.6e-109 398.7 337 63.8
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 3.0e-108 396.0 389 58.6
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.2e-104 384.0 322 64.6
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 1.6e-101 373.6 369 56.4
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 3.9e-100 369.0 353 59.2
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.5e-99 367.1 318 61.9
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 9.3e-94 347.8 329 56.2
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 4.5e-88 328.9 330 53.9
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 9.6e-83 311.2 327 51.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 2.1e-82 310.1 227 71.8
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 2.1e-82 310.1 205 76.1
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.0e-68 264.6 278 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.7e-66 257.3 294 48.0
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 2.8e-58 229.9 366 39.9
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.4e-52 211.1 301 40.5
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 5.9e-48 195.7 167 64.1
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.9e-47 193.4 191 57.6
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.5e-43 181.0 182 53.3
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.8e-41 174.1 119 64.7
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.0e-39 168.3 106 75.5
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.9e-39 166.8 104 80.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 2.6e-19 100.5 230 33.9
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 5.2e-12 76.3 51 68.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.5e-11 74.7 49 69.4
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.7e-10 70.1 79 55.7
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 2.1e-08 64.3 84 46.4
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 1.1e-06 58.5 93 38.7


User provided reference genes

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