Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.0e-166 589.0 289 100.0
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.9e-151 539.3 289 90.0
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 6.2e-147 524.2 288 86.1
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 6.2e-147 524.2 291 85.2
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.1e-146 521.9 287 87.8
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.9e-143 512.7 291 84.5
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 5.4e-143 511.1 293 84.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 5.4e-143 511.1 302 83.1
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.0e-143 510.8 288 85.1
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 9.2e-143 510.4 288 84.7
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 9.2e-143 510.4 288 84.7
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 2.7e-142 508.8 271 90.8
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 3.9e-141 505.0 355 71.8
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 8.6e-141 503.8 288 83.3
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.1e-140 503.4 278 87.4
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.3e-140 501.9 287 85.4
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.2e-139 500.0 288 86.5
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 4.7e-139 498.0 298 80.9
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 6.2e-139 497.7 280 85.7
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.3e-138 495.7 287 82.9
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 4.0e-138 495.0 288 83.0
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.0e-137 492.7 289 84.1
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.6e-137 492.3 283 85.5
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.6e-137 492.3 278 85.3
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 7.5e-137 490.7 278 85.3
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.3e-136 490.0 287 82.9
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.3e-136 490.0 278 85.6
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.3e-136 490.0 278 85.3
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.9e-136 488.8 292 82.5
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.3e-136 487.3 287 82.2
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 8.3e-136 487.3 287 82.2
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.4e-135 486.5 298 80.2
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.4e-135 486.5 288 81.2
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.4e-135 485.7 287 81.9
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.4e-135 485.7 288 81.2
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.4e-135 485.7 285 81.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 7.1e-135 484.2 287 82.6
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 7.1e-135 484.2 287 82.2
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.2e-134 483.4 286 82.5
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.7e-134 482.3 287 82.2
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.5e-134 481.9 288 80.6
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.5e-134 481.9 287 81.2
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 4.6e-134 481.5 288 80.6
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 7.8e-134 480.7 286 82.2
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.3e-133 479.2 288 79.9
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 2.3e-133 479.2 284 82.7
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 3.3e-132 475.3 285 81.1
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 4.3e-132 474.9 282 80.5
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 7.3e-132 474.2 288 79.5
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 7.3e-132 474.2 288 79.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-131 471.1 288 79.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 8.1e-131 470.7 288 78.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.4e-130 469.9 286 80.4
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 2.4e-130 469.2 288 79.2
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 3.1e-130 468.8 288 79.2
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 5.2e-130 468.0 288 78.8
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.5e-129 466.5 288 78.5
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 2.0e-129 466.1 272 80.1
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 3.4e-129 465.3 288 78.5
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.4e-129 465.3 288 78.5
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.3e-128 463.4 288 78.5
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.2e-128 462.6 288 78.5
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.2e-128 462.6 288 78.5
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 4.9e-128 461.5 288 78.1
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 4.9e-128 461.5 288 78.1
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.9e-128 461.5 288 78.1
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.2e-127 458.4 301 77.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.7e-126 455.7 288 79.9
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 3.5e-126 455.3 391 62.4
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 3.6e-123 445.3 226 92.9
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 8.1e-123 444.1 281 77.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.4e-121 438.7 287 77.0
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 7.1e-119 431.0 280 77.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 4.6e-118 428.3 288 75.3
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 6.0e-118 427.9 229 86.5
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 7.8e-118 427.6 344 66.6
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 3.9e-117 425.2 274 75.9
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 4.3e-116 421.8 224 87.5
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 9.6e-116 420.6 239 83.3
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.6e-115 419.9 283 76.3
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.5e-113 413.3 274 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 9.9e-113 410.6 282 70.9
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.9e-111 406.4 264 75.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 2.8e-107 392.5 288 69.4
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.7e-107 392.1 288 69.8
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.4e-106 389.4 261 75.1
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.2e-105 387.1 281 66.5
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 6.4e-104 381.3 207 86.5
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 8.4e-104 380.9 282 69.1
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.5e-103 379.4 263 73.0
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.2e-103 378.6 222 79.3
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.1e-99 366.3 279 62.4
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 8.2e-99 364.4 282 66.7
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.8e-98 363.2 279 62.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.5e-97 360.1 287 66.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 4.9e-96 355.1 267 64.0
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.8e-90 336.7 209 79.9
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.6e-89 332.8 241 72.2
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 9.4e-87 324.3 609 37.1
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 5.1e-85 318.5 281 60.9
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.2e-80 303.1 286 56.6
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 2.2e-75 286.6 191 67.0
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.0e-74 281.6 164 82.3
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 5.9e-73 278.5 300 53.7
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.1e-71 274.2 210 62.9
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 6.1e-70 268.5 192 70.8
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.4e-61 240.7 264 53.4
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-60 237.7 192 66.1
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-58 230.3 246 53.3
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 5.0e-56 222.2 127 80.3
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-51 207.2 178 57.9
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 2.2e-51 206.8 124 77.4
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-50 204.1 148 67.6
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.2e-47 192.6 129 72.9
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 2.4e-42 176.8 102 80.4
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 2.7e-41 173.3 90 87.8
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.5e-33 146.4 95 74.7
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.1e-31 141.4 275 34.5
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.4e-28 129.8 80 77.5
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 4.4e-28 129.4 281 29.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.8e-21 107.5 359 27.3
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.2e-12 78.2 47 76.6
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-10 70.1 52 71.2
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 2.8e-06 57.0 36 69.4


User provided reference genes

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