Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.6e-236 820.1 406 100.0
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.1e-224 780.8 406 95.8
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 1.2e-185 653.3 408 79.9
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 3.4e-183 645.2 405 79.5
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 3.3e-178 628.6 448 72.1
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 5.0e-171 604.7 449 69.7
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 2.5e-170 602.4 406 70.7
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 4.3e-170 601.7 405 73.6
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.8e-168 596.3 406 71.2
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.2e-168 594.7 406 71.2
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 6.8e-168 594.3 406 72.9
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 4.4e-167 591.7 406 70.9
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 5.8e-167 591.3 406 72.7
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 9.8e-167 590.5 407 71.3
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 9.8e-167 590.5 406 70.0
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 2.2e-166 589.3 406 72.2
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 3.7e-166 588.6 406 69.2
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.9e-166 588.2 406 70.7
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 8.3e-166 587.4 407 70.3
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.9e-165 586.3 406 70.4
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 5.4e-165 584.7 406 71.7
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 2.7e-164 582.4 406 72.4
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 4.6e-164 581.6 407 69.3
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 2.3e-163 579.3 406 70.0
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.9e-163 578.6 406 71.2
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 5.0e-163 578.2 406 69.7
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 6.6e-163 577.8 411 68.9
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 3.3e-162 575.5 407 70.5
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 5.6e-162 574.7 406 69.5
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 9.5e-162 573.9 406 68.7
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 3.6e-161 572.0 408 70.1
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 4.7e-161 571.6 406 69.5
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 4.7e-161 571.6 421 67.0
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 4.7e-161 571.6 407 68.1
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 6.2e-161 571.2 406 71.4
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 8.1e-161 570.9 406 69.7
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.1e-160 570.5 407 70.5
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 4.0e-160 568.5 411 68.1
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 4.0e-160 568.5 407 67.8
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 6.8e-160 567.8 408 67.6
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.2e-159 567.0 406 69.5
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 4.4e-159 565.1 407 69.8
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 9.9e-159 563.9 406 69.0
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.9e-158 562.4 407 68.3
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.1e-157 560.5 407 68.8
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 1.2e-156 557.0 408 67.6
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.7e-156 555.8 400 68.8
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.6e-156 555.1 406 68.0
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 7.8e-156 554.3 418 66.0
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 2.3e-155 552.7 413 67.6
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.5e-154 550.1 414 66.7
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 3.6e-153 545.4 412 66.3
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 6.2e-153 544.7 408 66.7
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 8.1e-153 544.3 402 67.4
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 4.0e-152 542.0 409 66.3
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 5.2e-152 541.6 427 64.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 3.4e-151 538.9 413 66.1
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.3e-150 537.0 408 66.9
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.7e-150 536.6 402 65.7
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 6.4e-150 534.6 409 66.0
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.1e-149 533.9 408 66.2
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 1.1e-149 533.9 407 64.6
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.4e-149 533.5 402 64.7
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 1.9e-149 533.1 408 66.7
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 2.4e-149 532.7 408 64.5
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.4e-149 532.7 410 66.3
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 2.4e-149 532.7 410 66.8
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 7.1e-149 531.2 407 63.1
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 9.2e-149 530.8 407 64.6
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.2e-148 530.4 408 64.2
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.1e-148 529.6 392 66.3
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 3.5e-148 528.9 408 64.7
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 5.1e-147 525.0 400 65.2
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.7e-147 524.2 436 62.6
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 8.7e-147 524.2 436 62.6
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.3e-146 521.9 410 66.1
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 9.6e-146 520.8 408 65.7
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 9.6e-146 520.8 408 65.7
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 1.6e-145 520.0 411 64.2
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 6.2e-145 518.1 406 62.1
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.1e-144 517.3 406 63.1
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 4.0e-144 515.4 406 62.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 5.2e-144 515.0 430 61.9
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-143 513.8 411 63.5
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.5e-143 513.5 365 69.0
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 1.7e-142 510.0 482 57.1
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 7.1e-141 504.6 397 61.7
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.2e-140 503.8 407 62.7
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.6e-140 503.4 399 64.4
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 7.8e-140 501.1 400 64.0
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.3e-139 500.4 413 60.0
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 2.3e-139 499.6 346 69.9
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.3e-139 499.6 368 67.4
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 2.3e-139 499.6 406 60.6
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 3.4e-135 485.7 409 62.3
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 7.6e-135 484.6 408 59.1
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 7.1e-133 478.0 388 61.3
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 2.1e-132 476.5 400 60.2
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 4.6e-132 475.3 408 60.0
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 4.6e-132 475.3 400 60.0
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 6.0e-132 474.9 402 60.9
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.5e-130 470.3 402 60.4
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.9e-130 469.9 262 87.8
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 2.5e-130 469.5 405 59.0
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 2.2e-126 456.4 334 66.8
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.9e-126 455.3 273 82.4
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.2e-125 452.6 365 62.7
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 4.2e-125 452.2 407 59.2
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 5.5e-125 451.8 388 59.0
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 9.3e-125 451.1 231 93.9
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.6e-124 448.7 402 56.5
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.7e-123 444.9 404 57.2
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.5e-122 443.7 398 56.3
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.3e-122 442.6 257 84.4
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 4.3e-122 442.2 403 57.3
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 9.6e-122 441.0 398 56.0
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 1.1e-120 437.6 403 57.8
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.3e-120 435.3 318 66.0
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 5.8e-119 431.8 405 56.8
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 1.0e-118 431.0 391 57.5
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 8.4e-118 427.9 405 56.8
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 8.4e-118 427.9 386 57.3
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 5.7e-114 415.2 406 55.4
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.7e-113 412.5 403 54.8
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 4.8e-113 412.1 408 56.6
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 8.2e-113 411.4 403 54.8
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 1.8e-112 410.2 403 54.6
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 2.6e-111 406.4 398 54.5
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 4.5e-111 405.6 329 61.1
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.7e-110 403.7 253 75.5
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 4.2e-109 399.1 362 56.6
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.6e-108 397.1 322 60.6
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.8e-107 393.7 262 76.0
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 2.8e-105 386.3 381 53.3
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 2.8e-105 386.3 381 53.3
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 6.3e-105 385.2 381 53.0
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 4.2e-101 372.5 360 56.4
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.2e-97 360.1 274 62.4
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 8.2e-97 358.2 382 49.5
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 5.9e-95 352.1 340 56.2
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 2.5e-93 346.7 341 55.1
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 2.9e-86 323.2 400 45.0
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 2.5e-85 320.1 398 44.0
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 7.2e-85 318.5 253 59.7
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 2.0e-82 310.5 400 42.8
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.8e-81 306.6 269 59.5
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 5.2e-75 285.8 365 46.3
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 9.8e-74 281.6 283 55.5
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.1e-72 278.1 409 39.6
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.5e-66 257.7 196 64.8
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.2e-65 253.8 158 73.4
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 4.6e-55 219.5 441 34.2
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 1.6e-44 184.5 132 73.5
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 1.8e-43 181.0 136 67.6
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 6.8e-43 179.1 371 35.8
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.7e-41 174.5 134 68.7
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 1.9e-37 161.0 454 27.5
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.4e-35 154.1 125 62.4
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 2.0e-34 151.0 304 38.2
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.4e-34 150.2 111 61.3
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 5.8e-34 149.4 304 38.5
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 2.9e-33 147.1 390 31.8
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 2.1e-28 131.0 331 27.5
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 4.9e-25 119.8 84 66.7
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 2.4e-24 117.5 67 85.1
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 8.7e-22 109.0 123 50.4
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 9.3e-16 89.0 74 60.8
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.3e-14 85.1 99 47.5
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-11 73.9 68 55.9
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 3.4e-10 70.5 44 79.5
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 5.8e-10 69.7 58 65.5
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.7e-09 68.2 60 61.7
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 7.1e-08 62.8 135 34.8
C02p60980 Brassica napus HOM05D003933 ORTHO05D004746 8.7e-06 55.8 60 50.0


User provided reference genes

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