Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.6e-161 572.0 287 100.0
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.4e-159 566.2 287 99.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.2e-119 432.2 287 77.7
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 3.7e-112 408.7 290 73.8
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 4.1e-111 405.2 290 73.8
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.1e-111 405.2 289 74.0
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.6e-110 403.3 291 71.5
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.1e-110 402.9 295 72.2
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 2.7e-110 402.5 287 73.2
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 3.5e-110 402.1 243 79.8
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 3.5e-110 402.1 295 72.9
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 6.0e-110 401.4 287 72.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.3e-109 400.2 289 71.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.3e-109 400.2 287 72.8
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.0e-109 399.1 299 71.6
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.5e-108 396.7 254 78.7
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.9e-108 396.4 289 72.0
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.9e-108 396.4 282 72.3
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.9e-108 396.4 249 79.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.9e-108 396.4 289 71.6
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 2.5e-108 396.0 288 72.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 3.3e-108 395.6 278 72.7
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 5.6e-108 394.8 263 76.0
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 5.6e-108 394.8 281 72.2
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 7.3e-108 394.4 237 81.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 9.5e-108 394.0 243 80.2
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 9.5e-108 394.0 291 72.9
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 9.5e-108 394.0 273 75.5
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.1e-107 392.9 310 67.7
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 4.7e-107 391.7 288 73.3
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 6.2e-107 391.3 289 71.6
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.1e-106 390.6 332 65.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.1e-106 390.6 283 72.4
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 1.1e-106 390.6 287 71.4
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 1.8e-106 389.8 239 80.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.8e-106 389.8 272 75.7
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.8e-106 389.8 242 81.0
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.1e-106 389.0 254 77.2
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 4.0e-106 388.7 272 75.0
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 4.0e-106 388.7 240 78.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 6.8e-106 387.9 273 72.9
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 8.9e-106 387.5 287 71.4
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 8.9e-106 387.5 300 70.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.2e-105 387.1 237 80.6
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.2e-105 387.1 290 69.0
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.2e-105 387.1 289 71.6
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.2e-105 387.1 301 69.1
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.2e-105 387.1 299 67.9
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.6e-105 386.0 292 70.9
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 3.4e-105 385.6 264 73.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 3.4e-105 385.6 287 69.3
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 9.9e-105 384.0 267 73.8
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.1e-103 380.6 290 71.0
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.9e-103 379.8 235 80.0
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.4e-103 379.4 281 70.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 3.2e-103 379.0 289 69.2
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.2e-103 379.0 276 70.7
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 4.2e-103 378.6 247 75.3
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 9.2e-103 377.5 289 68.9
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 2.1e-102 376.3 238 75.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 4.6e-102 375.2 283 68.9
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 6.0e-102 374.8 286 71.0
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.3e-101 372.9 286 67.8
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.9e-101 372.1 247 74.9
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 3.9e-101 372.1 272 70.6
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 3.9e-101 372.1 300 66.3
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-100 370.5 289 67.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-100 370.5 289 67.8
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.1e-100 370.5 289 67.8
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.1e-100 370.5 292 66.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.1e-100 370.5 232 78.4
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 2.5e-100 369.4 235 76.2
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.3e-100 368.6 297 68.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 5.6e-100 368.2 288 68.4
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 7.3e-100 367.9 290 66.2
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 7.3e-100 367.9 289 68.2
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 7.3e-100 367.9 289 68.2
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 9.6e-100 367.5 233 76.4
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 2.1e-99 366.3 210 84.3
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 2.8e-99 365.9 291 68.0
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 3.6e-99 365.5 291 67.0
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.2e-99 364.8 276 68.8
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 6.2e-99 364.8 235 75.7
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.4e-98 363.6 284 69.0
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.4e-98 362.8 293 66.2
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.4e-98 362.8 262 71.4
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.0e-98 362.1 292 66.4
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 5.3e-98 361.7 375 56.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 9.0e-98 360.9 245 72.7
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 2.0e-97 359.8 348 60.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.4e-97 358.6 288 67.0
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.8e-97 358.2 295 65.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.8e-97 358.2 295 65.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.3e-96 357.1 240 75.0
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.7e-96 356.7 295 65.1
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.8e-90 336.7 251 68.9
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.4e-89 332.4 236 69.1
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.8e-88 328.9 298 62.8
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.6e-86 323.6 234 66.7
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.8e-83 312.0 234 69.2
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.0e-78 295.0 216 71.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.2e-75 285.0 236 58.9
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 4.0e-74 282.3 240 57.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.9e-74 281.6 229 68.1
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 7.1e-71 271.6 202 62.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 3.0e-69 266.2 228 62.3
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.7e-67 259.2 166 75.3
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 5.5e-63 245.4 210 58.6
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.3e-45 186.8 281 43.8
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.6e-36 156.8 169 53.3
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 7.0e-34 148.7 95 78.9
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 2.5e-31 140.2 152 44.1
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.6e-30 137.5 200 40.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 3.0e-29 133.3 158 41.8
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.8e-29 132.1 93 72.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 3.4e-28 129.8 142 50.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 4.5e-25 119.4 131 45.8
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 7.8e-09 65.5 101 46.5
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.3e-08 63.9 119 35.3
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 1.2e-06 58.2 101 34.7


User provided reference genes

Program Settings