Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045262 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 2.0e-86 322.4 160 100.0
CSS0007484 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 1.4e-84 316.2 160 98.8
CSS0006524 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 2.3e-82 308.9 156 98.7
CSS0022990 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 1.1e-55 220.3 156 75.6
CSS0001478 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.9e-50 201.8 156 71.2
CSS0019124 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.3e-49 198.7 156 69.9
CSS0012670 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.9e-45 185.7 156 62.8
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 6.7e-18 94.7 182 39.0
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 6.7e-18 94.7 182 39.0
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 4.3e-17 92.0 184 39.1
CSS0029815 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.6e-14 82.8 178 37.1
CSS0050384 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.5e-14 82.0 178 37.6
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-12 77.0 176 37.5
Actinidia16423 Actinidia chinensis HOM05D000092 ORTHO05D000042 7.1e-12 74.7 179 33.5
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.0e-10 70.9 179 35.8
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 2.3e-10 69.7 175 33.7
Rhsim06G0161400 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.7e-10 68.2 137 38.0
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-09 67.4 155 36.8
Rhsim03G0015900 Rhododendron simsii HOM05D000997 ORTHO05D000828 1.1e-09 67.4 179 34.1
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 1.9e-09 66.6 106 43.4
Rhsim06G0161600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.3e-09 65.9 145 37.2
Rhsim06G0161900 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.3e-09 65.5 141 39.0
vmacro07864 Vaccinium macrocarpon HOM05D000092 ORTHO05D017715 4.3e-09 65.5 160 33.8
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 7.4e-09 64.7 136 35.3
RhsimUnG0106500 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-08 63.5 142 32.4
vmacro09389 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 2.2e-08 63.2 151 31.8
CSS0009386 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.7e-08 62.4 175 33.7
CSS0006875 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-07 60.5 154 31.8
Rhsim03G0014300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.4e-07 60.5 149 32.2
vmacro07866 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.4e-07 60.5 153 36.6
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-07 60.1 101 43.6
Rhsim03G0016800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-07 60.1 142 32.4
CSS0020621 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-07 59.3 144 34.7
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.1e-07 59.3 158 28.5
Actinidia12451 Actinidia chinensis HOM05D000092 ORTHO05D000042 4.1e-07 58.9 174 30.5
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 5.3e-07 58.5 107 40.2
vmacro09387 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 5.3e-07 58.5 167 31.7
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.0e-07 57.8 176 30.7
vmacro12194 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 9.0e-07 57.8 128 35.9
RhsimUnG0106800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-06 57.4 141 31.2
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-06 57.0 141 34.8
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-06 56.2 170 34.1
RhsimUnG0150300 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.6e-06 56.2 141 31.9
Rhsim03G0017100 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.4e-06 55.8 141 30.5
Rhsim06G0161800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.4e-06 55.8 136 35.3
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.5e-06 55.5 154 31.2
Glyma.13G260600 Glycine max HOM05D000092 ORTHO05D000042 5.9e-06 55.1 134 33.6
Actinidia20282 Actinidia chinensis HOM05D000092 ORTHO05D000042 7.7e-06 54.7 154 33.1
CSS0034659 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.0e-05 54.3 142 33.8
Rhsim03G0035100 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.0e-05 54.3 180 28.3


User provided reference genes

Program Settings