Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045260 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-83 312.8 152 100.0
CSS0015314 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.3e-47 193.4 150 63.3
CSS0012649 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-45 185.3 145 62.8
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.1e-33 145.6 202 42.1
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.1e-33 145.6 202 42.1
CSS0011923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-32 142.5 204 41.7
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.5e-31 137.9 264 34.8
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-30 137.1 202 42.6
CSS0038659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-29 133.3 194 40.7
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-29 132.5 278 32.7
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.0e-28 128.6 117 53.8
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.2e-28 128.3 117 53.8
CSS0049674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-26 122.9 154 44.2
CSS0013122 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.8e-26 121.7 94 61.7
CSS0012407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.3e-26 120.9 94 61.7
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.3e-26 120.9 260 32.7
CSS0025085 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.8e-25 119.8 94 61.7
CSS0011676 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-25 118.6 94 60.6
CSS0038669 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.4e-25 118.2 94 59.6
CSS0000031 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-24 116.7 94 58.5
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-24 115.9 261 30.3
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.0e-23 114.0 132 47.0
CSS0013579 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.2e-22 109.0 94 55.3
CSS0016179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-21 107.1 204 38.7
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-21 107.1 278 27.7
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.1e-21 106.3 117 39.3
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.8e-20 101.3 113 40.7
CSS0005709 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-19 100.5 178 35.4
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-19 100.1 275 26.5
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.7e-19 98.2 272 26.8
CSS0019901 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.2e-18 96.3 115 40.9
CSS0041570 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-17 92.0 114 38.6
CSS0007116 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.2e-17 90.9 115 38.3
CSS0000975 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.0e-16 89.7 121 43.0
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-15 87.4 182 33.5
CSS0024896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.0e-15 85.1 127 37.8
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-13 80.5 257 28.8
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.1e-13 79.7 238 29.4
PSO170G1956 Papaver somniferum HOM05D000003 ORTHO05D000006 2.3e-12 76.3 188 30.3
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-11 73.6 128 30.5
PSO724G0003 Papaver somniferum HOM05D000003 ORTHO05D000006 9.8e-11 70.9 193 28.5
PSO731G0096 Papaver somniferum HOM05D000003 ORTHO05D000006 1.3e-10 70.5 181 27.6
PSO017G1919 Papaver somniferum HOM05D000003 ORTHO05D000006 1.7e-10 70.1 118 35.6
PSO832G4187 Papaver somniferum HOM05D000003 ORTHO05D000006 2.9e-10 69.3 167 29.9
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-10 68.9 126 37.3
CSS0021103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.9e-10 68.6 98 35.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-10 68.2 149 30.2
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 1.1e-09 67.4 117 33.3
PSO675G0500 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-09 67.4 118 31.4
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-09 67.0 125 37.6
PSO151G0122 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-09 66.6 174 24.7
PSO210G7589 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-09 66.6 165 24.8
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 2.4e-09 66.2 149 29.5
Potri.003G010697 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.4e-09 66.2 140 32.9
CSS0035444 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-09 65.9 128 35.9
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-09 65.9 128 35.9
PSO135G0136 Papaver somniferum HOM05D000003 ORTHO05D000006 3.2e-09 65.9 124 30.6
CSS0009846 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-09 64.3 129 35.7
PSO063G5487 Papaver somniferum HOM05D000003 ORTHO05D000006 9.2e-09 64.3 125 32.8
HanXRQChr05g0136121 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-08 63.9 112 32.1
PSO832G2789 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-08 63.9 117 26.5
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-08 63.5 114 29.8
Lj4g0005812 Lotus japonicus HOM05D007807 ORTHO05D000006 1.6e-08 63.5 122 30.3
Atru.chr10.1002 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-08 63.2 113 30.1
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 2.7e-08 62.8 128 28.1
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-08 62.8 125 32.0
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 110 30.9
ECA238G0304 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.5e-08 62.4 126 27.8
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 3.5e-08 62.4 135 29.6
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 4.6e-08 62.0 110 27.3
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 4.6e-08 62.0 118 29.7
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 7.8e-08 61.2 111 29.7
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.8 95 33.7
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-07 60.5 190 27.9
ECA233G5627 Erigeron canadensis HOM05D000003 ORTHO05D000006 1.3e-07 60.5 126 28.6
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.3e-07 60.5 117 29.9
ECA247G0882 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.9e-07 58.9 119 27.7
HanXRQChr13g0387241 Helianthus annuus HOM05D000003 ORTHO05D000004 3.9e-07 58.9 135 28.1
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.9e-07 58.9 124 29.0
PSO063G1566 Papaver somniferum HOM05D000003 ORTHO05D000006 5.0e-07 58.5 125 29.6
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-07 58.2 137 31.4
CSS0009252 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.6e-07 58.2 106 32.1
PSO675G3554 Papaver somniferum HOM05D000003 ORTHO05D000006 6.6e-07 58.2 140 29.3
ECA233G3171 Erigeron canadensis HOM05D000002 ORTHO05D000004 1.1e-06 57.4 126 27.0
PSO532G0034 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-06 57.4 125 27.2
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 131 29.0
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 147 30.6
PSO063G4661 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-06 57.0 115 29.6
HanXRQChr07g0188391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.9e-06 56.6 119 35.3
PSO151G0232 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-06 56.6 124 24.2
Atru.chr4.1626 Acer truncatum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 173 24.9
ECA240G1637 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-06 56.2 124 25.8
PSO063G4608 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 118 29.7
PSO198G0072 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 125 29.6
PSO210G7613 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 118 29.7
PSO356G0004 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 124 28.2
PSO384G3189 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-06 56.2 89 34.8
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 2.5e-06 56.2 158 27.8
Atru.chr5.2394 Acer truncatum HOM05D000024 ORTHO05D000006 3.3e-06 55.8 113 26.5
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 3.3e-06 55.8 108 26.9
PSO017G0831 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 98 32.7
PSO017G0976 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 125 28.8
PSO532G0061 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 124 25.0
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 95 30.5
Atru.chr7.1397 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 90 31.1
HanXRQChr07g0194271 Helianthus annuus HOM05D000003 ORTHO05D000004 4.3e-06 55.5 119 32.8
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 146 26.7
Hund17670 Selenicereus undatus HOM05D000003 ORTHO05D000006 5.6e-06 55.1 107 29.0
SHI35445 Sapria himalayana HOM05D000024 ORTHO05D000006 9.5e-06 54.3 98 31.6


User provided reference genes

Program Settings