Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.0e-141 506.9 289 100.0
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.0e-110 401.4 289 74.7
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 8.2e-99 364.4 280 68.6
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 7.4e-76 288.1 156 89.7
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 5.9e-65 251.9 277 54.9
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.9e-63 246.9 280 57.1
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 1.6e-62 243.8 318 47.5
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.8e-58 230.3 220 56.4
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.0e-56 224.6 275 49.5
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.8e-50 203.8 275 44.4
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.0e-49 200.3 330 40.3
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.7e-43 179.5 321 39.6
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 1.1e-10 71.6 114 35.1
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 1.1e-07 61.6 121 35.5
FAN25G3366 Fragaria x ananassa HOM05D016656 ORTHO05D015012 1.1e-07 61.6 118 33.1
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 2.5e-07 60.5 103 32.0
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 3.3e-07 60.1 103 32.0
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 3.3e-07 60.1 103 32.0
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 9.6e-07 58.5 106 36.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.8e-06 57.0 103 29.1
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 2.8e-06 57.0 165 27.9
CSS0044889 Camellia sinensis var. sinensis HOM05D008778 ORTHO05D003639 3.6e-06 56.6 157 32.5
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.8e-06 56.2 107 34.6
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 6.2e-06 55.8 107 33.6
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 8.1e-06 55.5 167 26.3
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 8.1e-06 55.5 107 36.4


User provided reference genes

Program Settings