Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.0e-281 970.7 468 100.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.0e-276 954.5 468 98.7
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.2e-216 756.5 472 77.3
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 8.0e-213 743.8 467 78.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.2e-210 735.7 475 76.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.2e-210 735.7 473 76.1
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.1e-206 723.4 472 73.9
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 4.4e-195 684.9 473 74.0
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.5e-192 675.2 480 69.2
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.0e-192 674.5 480 69.0
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 6.0e-184 647.9 459 68.6
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 3.0e-183 645.6 460 70.4
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 8.9e-180 634.0 470 70.2
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.6e-179 632.5 470 65.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 5.8e-179 631.3 482 64.9
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 8.4e-178 627.5 471 65.6
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.2e-176 623.6 459 68.2
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 6.0e-176 621.3 470 63.4
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 5.1e-175 618.2 466 64.4
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.3e-174 615.5 470 63.0
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.0e-171 606.3 469 65.5
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.1e-169 600.5 468 62.6
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 6.0e-168 594.7 465 64.3
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.2e-162 576.2 466 61.4
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 2.9e-162 575.9 478 60.3
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 6.4e-162 574.7 466 60.1
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.4e-161 573.5 455 60.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.6e-160 570.1 452 60.2
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.5e-160 568.9 472 61.2
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 4.6e-160 568.5 469 58.8
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 4.6e-160 568.5 457 62.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 6.0e-160 568.2 474 61.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 6.0e-160 568.2 469 58.6
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.0e-159 567.4 452 59.7
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 2.3e-159 566.2 460 61.1
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.8e-157 559.3 469 61.8
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.4e-156 556.2 453 60.9
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 9.0e-156 554.3 466 61.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.2e-155 553.9 454 60.1
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 7.6e-155 551.2 450 59.1
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.0e-154 550.8 453 60.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 8.4e-154 547.7 481 58.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.1e-152 543.1 466 58.4
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.7e-152 542.7 463 59.0
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 3.9e-151 538.9 461 57.7
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 8.7e-151 537.7 461 60.1
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 1.5e-150 537.0 456 60.1
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 3.3e-150 535.8 461 59.4
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 4.3e-150 535.4 475 58.5
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.3e-149 533.9 457 59.1
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.6e-149 533.5 455 59.6
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.8e-149 532.7 459 58.2
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 3.7e-149 532.3 457 58.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.1e-148 530.8 461 59.0
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.4e-148 530.4 461 59.9
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.1e-148 529.3 457 58.2
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.3e-148 528.5 484 58.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 6.9e-148 528.1 491 57.8
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.6e-147 526.2 457 58.0
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 7.6e-147 524.6 474 56.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-146 523.5 457 57.8
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.5e-145 519.6 486 57.0
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.2e-145 519.2 441 60.1
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.1e-144 516.5 465 56.6
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.3e-143 513.1 484 56.8
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 5.3e-140 501.9 452 57.5
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.5e-139 500.4 482 55.4
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.5e-139 500.4 461 55.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 7.7e-139 498.0 478 54.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 2.2e-138 496.5 458 55.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 9.7e-134 481.1 424 58.0
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.3e-133 480.7 458 52.8
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.8e-132 476.9 474 53.8
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 2.0e-131 473.4 474 53.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.5e-131 472.2 324 71.3
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.4e-124 449.9 449 50.3
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 7.0e-124 448.4 460 50.0
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 9.1e-124 448.0 464 51.3
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.1e-121 441.0 494 50.2
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.9e-121 440.3 413 54.7
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 4.2e-121 439.1 455 49.7
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.6e-120 437.2 460 52.2
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 5.2e-119 432.2 452 49.8
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.2e-117 426.8 452 50.2
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 9.4e-113 411.4 462 49.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.3e-111 406.8 464 47.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 6.8e-111 405.2 454 48.9
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 6.8e-111 405.2 454 48.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 4.4e-110 402.5 452 45.6
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 9.8e-110 401.4 452 48.2
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.4e-108 396.7 454 46.9
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 7.0e-108 395.2 454 47.8
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 3.5e-107 392.9 449 47.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.7e-106 390.6 452 47.8
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.9e-105 387.1 452 47.8
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.2e-104 384.4 454 47.4
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.5e-102 377.5 309 63.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.7e-96 355.9 454 44.5
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.0e-95 354.8 362 49.2
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 3.5e-91 339.7 322 58.7
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 5.0e-90 335.9 271 61.3
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.0e-86 323.9 309 55.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.6e-75 287.7 488 34.2
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.5e-70 271.2 253 56.5
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.2e-64 251.5 334 42.5
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.1e-55 221.9 521 31.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 2.2e-53 214.2 386 35.8
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.4e-52 210.7 236 49.6
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.3e-45 188.3 150 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 3.9e-42 176.8 360 32.5
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.8e-34 151.4 192 44.3
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.3e-32 145.2 115 57.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.4e-31 141.0 133 52.6
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.4e-31 141.0 101 66.3
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.2e-30 138.7 560 25.4
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 5.0e-29 133.3 124 54.8
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.6e-27 128.3 89 74.2
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.1e-26 123.2 91 62.6
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 1.6e-24 118.2 84 70.2
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 8.2e-24 115.9 166 38.6
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.2e-22 112.1 106 47.2
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.0e-22 111.3 73 69.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 5.3e-15 86.7 93 47.3
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.5e-14 83.6 243 29.6
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 3.2e-12 77.4 138 37.7


User provided reference genes

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