Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.1e-136 488.4 238 100.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.8e-99 366.3 234 80.3
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.1e-72 274.2 201 69.7
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 6.6e-46 188.3 111 79.3
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.7e-44 182.2 126 70.6
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.6e-38 161.4 153 61.4
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.4e-34 149.4 120 64.2
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.4e-34 149.4 120 64.2
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 6.2e-28 128.6 134 58.2
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.7e-25 120.6 149 54.4
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.7e-23 113.2 143 51.0
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 5.6e-21 105.5 213 32.9
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.8e-19 100.5 200 38.0
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 4.0e-19 99.4 191 35.1
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-18 97.4 217 32.3
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-18 96.7 200 31.0
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.5e-18 95.9 210 30.5
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.5e-18 95.9 217 32.3
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.9e-18 94.7 195 33.3
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 1.7e-17 94.0 250 31.2
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 8.4e-17 91.7 270 26.7
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 1.1e-16 91.3 85 51.8
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-16 90.9 172 33.1
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.9e-16 90.5 200 31.5
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 3.2e-16 89.7 265 26.4
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 4.2e-16 89.4 261 28.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.2e-15 87.8 202 30.2
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-15 87.0 202 31.2
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 2.1e-15 87.0 138 39.1
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.0e-15 85.5 80 48.8
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 6.0e-15 85.5 243 28.4
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-14 84.7 73 53.4
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-14 84.3 215 27.9
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-14 84.0 73 49.3
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-14 84.0 175 31.4
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 2.3e-14 83.6 170 34.1
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-14 83.2 75 53.3
CSS0018917 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 6.7e-14 82.0 88 52.3
CSS0036287 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 6.7e-14 82.0 88 52.3
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.7e-14 82.0 227 28.2
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 6.7e-14 82.0 275 26.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 8.7e-14 81.6 216 29.2
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 8.7e-14 81.6 80 50.0
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-13 81.3 100 43.0
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-13 80.9 211 30.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-13 80.9 74 50.0
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 3.3e-13 79.7 75 50.7
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.3e-13 79.3 80 47.5
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 4.3e-13 79.3 208 30.3
CSS0033653 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 5.6e-13 79.0 86 52.3
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.6e-13 79.0 74 48.6
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-12 77.8 94 43.6
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 2.1e-12 77.0 77 48.1
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-12 77.0 96 42.7
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.8e-12 76.6 198 28.3
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.8e-12 76.6 74 48.6
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-12 76.3 199 29.1
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-12 76.3 82 47.6
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.8e-12 75.9 181 30.4
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 6.2e-12 75.5 77 46.8
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 6.2e-12 75.5 72 48.6
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 6.2e-12 75.5 110 38.2
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-12 75.1 168 33.3
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-12 75.1 111 40.5
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 1.4e-11 74.3 82 41.5
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 1.8e-11 73.9 188 29.8
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 2.4e-11 73.6 204 30.4
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-11 73.6 80 45.0
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-11 73.6 79 41.8
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-11 73.6 80 46.2
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-11 72.4 64 51.6
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.9e-11 72.0 127 39.4
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 6.9e-11 72.0 201 31.3
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-10 70.9 192 29.7
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.0e-10 70.5 61 47.5
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 3.4e-10 69.7 73 46.6
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.5e-10 69.3 75 46.7
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 7.6e-10 68.6 80 40.0
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 2.2e-09 67.0 189 30.2
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-09 66.6 156 32.1
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 2.9e-09 66.6 59 50.8
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.8e-09 66.2 72 41.7
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 8.4e-09 65.1 85 36.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 8.4e-09 65.1 73 41.1
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 8.4e-09 65.1 172 27.3
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 8.4e-09 65.1 138 31.9
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 1.4e-08 64.3 85 36.5
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.4e-08 64.3 189 26.5
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.5e-08 63.5 121 38.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 2.5e-08 63.5 80 37.5
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 4.2e-08 62.8 82 37.8
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 5.5e-08 62.4 66 47.0
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 9.3e-08 61.6 144 27.8
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-07 61.2 137 28.5
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.6e-07 60.8 70 48.6
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.8e-06 57.4 140 26.4
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 2.3e-06 57.0 86 37.2
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.3e-06 57.0 159 28.9
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 3.9e-06 56.2 50 52.0
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 6.7e-06 55.5 67 43.3


User provided reference genes

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