Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 8.8e-36 152.9 68 100.0
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 3.1e-25 117.9 74 70.3
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 3.5e-24 114.4 71 71.8
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.7e-23 112.1 71 71.8
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 3.8e-23 110.9 70 70.0
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 5.0e-23 110.5 74 66.2
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 6.5e-23 110.2 68 70.6
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 1.5e-22 109.0 63 74.6
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 5.5e-22 107.1 74 62.2
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.2e-21 105.9 68 69.1
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.2e-21 105.9 71 70.4
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 3.6e-21 104.4 68 64.7
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 6.1e-21 103.6 67 65.7
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 6.1e-21 103.6 68 70.6
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 1.8e-20 102.1 68 70.6
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.3e-20 101.7 59 71.2
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 3.0e-20 101.3 68 64.7
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 3.0e-20 101.3 50 80.0
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 4.0e-20 100.9 68 64.7
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 4.0e-20 100.9 68 69.1
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 4.0e-20 100.9 68 64.7
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 5.2e-20 100.5 59 69.5
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 5.2e-20 100.5 48 83.3
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.2e-18 95.1 45 82.2
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.2e-18 95.1 45 82.2
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 2.2e-18 95.1 45 82.2
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 2.2e-18 95.1 51 70.6
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 3.7e-18 94.4 68 55.9
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 6.3e-18 93.6 68 61.8
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 8.3e-18 93.2 62 62.9
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 1.1e-17 92.8 69 58.0
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 1.8e-17 92.0 69 59.4
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 4.1e-17 90.9 68 58.8
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 9.1e-17 89.7 68 57.4
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 9.1e-17 89.7 68 52.9
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.7e-15 85.5 77 48.1
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.8e-15 84.3 77 46.8
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.8e-15 84.3 68 52.9
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 1.9e-14 82.0 49 65.3
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 7.2e-14 80.1 43 67.4
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 4.7e-13 77.4 44 65.9
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 4.7e-13 77.4 64 45.3
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 4.7e-13 77.4 63 50.8
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 6.1e-13 77.0 62 43.5
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 6.1e-13 77.0 43 62.8
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 8.0e-13 76.6 49 59.2
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 8.0e-13 76.6 43 60.5
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 8.0e-13 76.6 43 58.1
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 8.0e-13 76.6 43 60.5
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 1.4e-12 75.9 43 62.8
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 2.3e-12 75.1 43 55.8
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 3.0e-12 74.7 53 54.7
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 3.0e-12 74.7 63 46.0
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 4.0e-12 74.3 66 45.5
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 1.2e-11 72.8 43 58.1
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 1.5e-11 72.4 43 55.8
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 1.5e-11 72.4 43 55.8
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 2.0e-11 72.0 55 45.5
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 2.0e-11 72.0 49 51.0
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 2.6e-11 71.6 43 55.8
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 2.6e-11 71.6 62 46.8
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 2.6e-11 71.6 43 53.5
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 2.6e-11 71.6 43 60.5
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.4e-11 71.2 43 53.5
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.4e-11 71.2 57 45.6
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 3.4e-11 71.2 43 55.8
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 4.4e-11 70.9 43 58.1
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 4.4e-11 70.9 43 58.1
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 4.4e-11 70.9 51 49.0
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 5.7e-11 70.5 43 55.8
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 5.7e-11 70.5 69 42.0
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 5.7e-11 70.5 46 58.7
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 7.5e-11 70.1 43 53.5
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 7.5e-11 70.1 43 55.8
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 9.8e-11 69.7 43 51.2
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 9.8e-11 69.7 43 53.5
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 9.8e-11 69.7 43 53.5
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 9.8e-11 69.7 43 53.5
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 1.3e-10 69.3 43 53.5
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.3e-10 69.3 43 53.5
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 2.2e-10 68.6 43 51.2
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 2.8e-10 68.2 43 53.5
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 3.7e-10 67.8 70 50.0
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 4.8e-10 67.4 62 40.3
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 4.8e-10 67.4 62 38.7
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 6.3e-10 67.0 43 55.8
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 6.3e-10 67.0 43 51.2
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 6.3e-10 67.0 43 51.2
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 8.3e-10 66.6 43 53.5
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 1.1e-09 66.2 43 55.8
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 1.4e-09 65.9 43 51.2
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 4.1e-09 64.3 64 48.4
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 5.4e-09 63.9 44 59.1
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 7.7e-08 60.1 32 68.8


User provided reference genes

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