Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029567 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 5.7e-62 240.7 121 100.0
CSS0045169 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 5.7e-62 240.7 121 100.0
CSS0030372 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 4.4e-54 214.5 130 86.2
CSS0049937 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 3.5e-43 178.3 126 77.8
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 3.8e-42 174.9 120 75.8
CSS0049796 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 6.1e-40 167.5 122 75.4
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 4.1e-36 154.8 129 63.6
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 1.0e-34 150.2 120 65.0
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 1.9e-33 146.0 119 63.0
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 5.7e-30 134.4 119 60.5
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 9.8e-30 133.7 119 58.8
vmacro06244 Vaccinium macrocarpon HOM05D002350 ORTHO05D000091 2.2e-29 132.5 118 60.2
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 4.9e-29 131.3 118 55.1
Sopen06g017040 Solanum pennellii HOM05D002350 ORTHO05D000091 4.9e-29 131.3 118 55.1
Nitab4.5_0000165g0050 Nicotiana tabacum HOM05D002350 ORTHO05D000091 5.4e-28 127.9 99 60.6
Nitab4.5_0001354g0030 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.0e-27 125.9 99 59.6
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.3e-26 123.2 128 53.9
Oeu064188.1 Olea europaea HOM05D002350 ORTHO05D000091 5.0e-26 121.3 119 52.1
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 8.6e-26 120.6 119 53.8
Migut.N01382 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.9e-25 119.4 131 48.9
Peaxi162Scf00824g00113 Petunia axillaris HOM05D002350 ORTHO05D000091 1.9e-25 119.4 117 53.0
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 4.3e-25 118.2 118 54.2
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 4.7e-24 114.8 122 50.0
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 4.7e-24 114.8 88 58.0
TAR624G0594 Trochodendron aralioides HOM05D002350 ORTHO05D000091 6.2e-24 114.4 128 51.6
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 1.8e-23 112.8 125 44.0
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 8.9e-23 110.5 97 56.7
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 1.2e-22 110.2 123 45.5
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 3.4e-22 108.6 119 50.4
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 3.4e-22 108.6 120 49.2
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 4.4e-22 108.2 119 52.1
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 9.8e-22 107.1 109 53.2
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 2.2e-21 105.9 119 50.4
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 2.9e-21 105.5 112 52.7
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 3.7e-21 105.1 89 58.4
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 3.7e-21 105.1 77 63.6
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 4.9e-21 104.8 119 48.7
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 4.9e-21 104.8 92 56.5
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 6.4e-21 104.4 124 42.7
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 8.3e-21 104.0 114 52.6
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 8.3e-21 104.0 119 46.2
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 1.1e-20 103.6 112 51.8
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 1.4e-20 103.2 118 45.8
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.4e-20 103.2 122 43.4
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 1.9e-20 102.8 125 47.2
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 3.2e-20 102.1 118 46.6
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 3.2e-20 102.1 112 51.8
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 4.1e-20 101.7 137 41.6
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 4.1e-20 101.7 120 48.3
HanXRQChr16g0503801 Helianthus annuus HOM05D002350 ORTHO05D000091 4.1e-20 101.7 118 47.5
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 4.1e-20 101.7 95 52.6
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 9.2e-20 100.5 131 44.3
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 9.2e-20 100.5 108 51.9
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 2.7e-19 99.0 131 46.6
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 3.5e-19 98.6 122 46.7
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 4.6e-19 98.2 116 49.1
CAN.G160.38 Capsicum annuum HOM05D002350 ORTHO05D000091 7.8e-19 97.4 109 50.5
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 3.0e-18 95.5 97 50.5
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 8.6e-18 94.0 88 52.3
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 8.6e-18 94.0 120 41.7
Sabra06G0125300 Salix brachista HOM05D002350 ORTHO05D000091 1.1e-17 93.6 87 52.9
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 1.5e-17 93.2 88 53.4
SalBow5G3880 Salvia bowleyana HOM05D002350 ORTHO05D000091 1.9e-17 92.8 134 35.8
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 3.3e-17 92.0 102 42.2
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 4.3e-17 91.7 120 43.3
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 5.6e-17 91.3 118 44.1
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 7.3e-17 90.9 104 47.1
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 9.5e-17 90.5 94 44.7
Aqoxy6G02290 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 1.6e-16 89.7 73 57.5
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 1.6e-16 89.7 119 42.9
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 1.6e-16 89.7 119 42.0
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 2.1e-16 89.4 121 42.1
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 2.1e-16 89.4 118 44.1
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 2.1e-16 89.4 79 55.7
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 2.8e-16 89.0 118 44.1
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 4.7e-16 88.2 119 42.0
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 4.7e-16 88.2 121 41.3
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 8.1e-16 87.4 81 50.6
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 1.1e-15 87.0 112 42.0
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 1.8e-15 86.3 119 38.7
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 2.3e-15 85.9 121 40.5
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 3.1e-15 85.5 119 37.8
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 8.9e-15 84.0 118 39.0
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 8.9e-15 84.0 118 39.0
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 8.9e-15 84.0 98 43.9
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 1.2e-14 83.6 81 46.9
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 1.2e-14 83.6 95 47.4
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 1.2e-14 83.6 98 43.9
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 1.5e-14 83.2 97 45.4
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 1.5e-14 83.2 95 46.3
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 2.0e-14 82.8 109 44.0
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 2.0e-14 82.8 119 37.0
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.0e-14 82.8 82 47.6
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 2.0e-14 82.8 118 42.4
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 2.0e-14 82.8 112 42.0
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 2.6e-14 82.4 97 44.3
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 2.6e-14 82.4 132 39.4
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 2.6e-14 82.4 97 44.3
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 2.6e-14 82.4 81 45.7
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.4e-14 82.0 119 37.8
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 3.4e-14 82.0 118 39.0
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 3.4e-14 82.0 118 39.0
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 3.4e-14 82.0 118 39.0
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 3.4e-14 82.0 118 39.0
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 3.4e-14 82.0 118 39.0
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 4.4e-14 81.6 81 48.1
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 4.4e-14 81.6 119 38.7
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 7.5e-14 80.9 104 45.2
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 7.5e-14 80.9 94 48.9
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 7.5e-14 80.9 97 43.3
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 9.8e-14 80.5 116 38.8
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 9.8e-14 80.5 119 38.7
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 9.8e-14 80.5 95 45.3
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 9.8e-14 80.5 117 41.0
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 9.8e-14 80.5 83 47.0
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 1.3e-13 80.1 114 38.6
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 1.3e-13 80.1 86 46.5
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 1.7e-13 79.7 81 46.9
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 1.7e-13 79.7 111 40.5
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 2.2e-13 79.3 81 45.7
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 2.2e-13 79.3 97 42.3
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 2.9e-13 79.0 82 45.1
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 3.7e-13 78.6 104 44.2
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 3.7e-13 78.6 81 48.1
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 4.9e-13 78.2 83 45.8
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 4.9e-13 78.2 81 45.7
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 4.9e-13 78.2 115 40.9
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 6.4e-13 77.8 89 43.8
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 8.3e-13 77.4 116 37.1
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 8.3e-13 77.4 129 38.8
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 1.1e-12 77.0 127 40.2
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 1.4e-12 76.6 104 43.3
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 1.4e-12 76.6 80 47.5
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 1.4e-12 76.6 121 36.4
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 1.9e-12 76.3 89 42.7
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 1.9e-12 76.3 87 47.1
C07p01730 Brassica napus HOM05D002350 ORTHO05D000091 2.4e-12 75.9 83 43.4
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 2.4e-12 75.9 121 36.4
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 3.2e-12 75.5 91 42.9
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.2e-12 75.5 91 40.7
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.1e-12 75.1 97 42.3
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.1e-12 75.1 97 42.3
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.1e-12 75.1 97 42.3
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 4.1e-12 75.1 103 42.7
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 5.4e-12 74.7 119 36.1
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 5.4e-12 74.7 119 36.1
SEGI_05646 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 2.7e-11 72.4 115 39.1
SEGI_17992 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 2.7e-11 72.4 115 39.1
Ca_25564_v3 Cicer arietinum L. HOM05D002350 ORTHO05D000091 6.0e-11 71.2 91 37.4
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 7.8e-11 70.9 127 37.0
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.0e-10 70.5 87 44.8
AUR62042309 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.3e-10 70.1 66 53.0
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 3.0e-10 68.9 116 37.1
Hund09132 Selenicereus undatus HOM05D002350 ORTHO05D000091 3.9e-10 68.6 97 40.2
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 1.5e-09 66.6 100 39.0
AagrBONN_evm.TU.Sc2ySwM_368.2512 Anthoceros agrestis HOM05D002350 ORTHO05D000091 1.9e-09 66.2 107 41.1
CDE05G2422 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 2.5e-09 65.9 54 55.6
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 3.3e-09 65.5 83 42.2
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 9.5e-09 63.9 92 40.2
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 3.6e-08 62.0 132 32.6
RcHm_v2.0_Chr2g0091681 Rosa chinensis HOM05D002350 ORTHO05D000091 6.2e-08 61.2 49 53.1
BcaB03g16780 Brassica carinata HOM05D002350 ORTHO05D000091 1.1e-07 60.5 84 41.7
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.2e-06 57.0 61 44.3
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 7.6e-06 54.3 95 36.8


User provided reference genes

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