Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045134 Camellia sinensis var. sinensis HOM05D058272 ORTHO05D109697 4.8e-69 264.2 121 100.0
CSS0039055 Camellia sinensis var. sinensis HOM05D058272 ORTHO05D109206 2.0e-62 242.3 133 85.7
CSS0021433 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 4.0e-31 138.3 127 58.3
CSS0035898 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 4.4e-30 134.8 142 55.6
CSS0018472 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 3.3e-25 118.6 102 62.7
CSS0014457 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 8.9e-23 110.5 127 50.4
CSS0015709 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 6.6e-18 94.4 112 51.8
CAN.G80.41 Capsicum annuum HOM05D002358 ORTHO05D002454 6.8e-07 57.8 103 36.9
CSS0046815 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 8.9e-07 57.4 25 92.0
CSS0010929 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 1.2e-06 57.0 25 96.0
Hma1.2p1_0328F.1_g126810 Hydrangea macrophylla HOM05D002358 ORTHO05D002454 1.2e-06 57.0 112 31.2
Hma1.2p1_1768F.1_g301580 Hydrangea macrophylla HOM05D002358 ORTHO05D002454 1.2e-06 57.0 112 32.1
MD17G1096000 Malus domestica HOM05D002358 ORTHO05D002454 1.2e-06 57.0 67 44.8
GSVIVG01030602001 Vitis vinifera HOM05D000109 ORTHO05D000520 1.5e-06 56.6 67 49.3
MD09G1069800 Malus domestica HOM05D002358 ORTHO05D002454 2.0e-06 56.2 67 44.8
vmacro12209 Vaccinium macrocarpon HOM05D002358 ORTHO05D002454 2.6e-06 55.8 97 37.1
Solyc05g045660.3 Solanum lycopersicum HOM05D002358 ORTHO05D002454 3.4e-06 55.5 69 46.4
Sopen05g026970 Solanum pennellii HOM05D002358 ORTHO05D002454 3.4e-06 55.5 69 46.4
PGSC0003DMG400005268 Solanum tuberosum HOM05D002358 ORTHO05D002454 3.4e-06 55.5 69 46.4
CAN.G846.7 Capsicum annuum HOM05D002358 ORTHO05D002454 4.4e-06 55.1 67 47.8
Prupe.3G217900 Prunus persica HOM05D000109 ORTHO05D000520 4.4e-06 55.1 67 44.8
Nitab4.5_0000006g0130 Nicotiana tabacum HOM05D002358 ORTHO05D002454 5.8e-06 54.7 69 46.4
Peaxi162Scf00462g00028 Petunia axillaris HOM05D002358 ORTHO05D002454 5.8e-06 54.7 69 46.4
CSS0040511 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 7.6e-06 54.3 25 88.0
Nitab4.5_0000631g0130 Nicotiana tabacum HOM05D002358 ORTHO05D002454 7.6e-06 54.3 114 36.8
Oeu021398.1 Olea europaea HOM05D002358 ORTHO05D002454 7.6e-06 54.3 110 37.3
Carub.0003s2175 Capsella rubella HOM05D002358 ORTHO05D002454 9.9e-06 53.9 68 44.1


User provided reference genes

Program Settings