Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.9e-74 282.0 159 100.0
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 3.6e-64 248.4 159 89.9
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 4.4e-62 241.5 159 74.8
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 9.1e-60 233.8 159 69.8
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 1.6e-59 233.0 159 70.4
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.0e-59 232.6 159 81.8
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 3.5e-59 231.9 159 69.8
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.0e-58 230.3 159 69.8
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 6.6e-58 227.6 159 67.9
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 1.1e-57 226.9 159 68.6
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 1.9e-57 226.1 159 77.4
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 1.9e-57 226.1 157 68.2
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 7.2e-57 224.2 159 67.3
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 9.5e-57 223.8 159 76.7
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 2.1e-56 222.6 159 66.0
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 3.6e-56 221.9 158 67.1
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 4.7e-56 221.5 154 68.8
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 4.7e-56 221.5 159 67.9
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 8.0e-56 220.7 160 67.5
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.0e-55 220.3 160 68.1
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.0e-55 220.3 160 68.1
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 3.0e-55 218.8 160 68.1
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.0e-55 218.4 159 66.0
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 5.2e-55 218.0 162 67.9
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 6.8e-55 217.6 159 66.0
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 8.9e-55 217.2 158 65.8
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 8.9e-55 217.2 159 65.4
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 8.9e-55 217.2 157 68.8
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 1.2e-54 216.9 160 70.0
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.6e-54 215.7 159 65.4
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 2.6e-54 215.7 156 67.3
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 4.4e-54 214.9 153 68.0
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 5.7e-54 214.5 159 70.4
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 7.5e-54 214.2 159 65.4
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 7.5e-54 214.2 159 65.4
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 7.5e-54 214.2 161 67.1
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 7.5e-54 214.2 154 68.2
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 9.8e-54 213.8 159 65.4
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 1.3e-53 213.4 157 68.2
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 1.7e-53 213.0 154 67.5
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 2.2e-53 212.6 154 67.5
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.9e-53 212.2 159 64.8
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.1e-52 210.3 159 64.8
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 1.1e-52 210.3 159 64.2
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.8e-52 209.5 159 63.5
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.8e-52 209.5 159 67.3
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 3.2e-52 208.8 159 64.2
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 5.4e-52 208.0 159 65.4
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.6e-51 206.5 137 88.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 2.7e-51 205.7 158 63.9
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.7e-51 205.7 159 64.2
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 2.9e-50 202.2 159 62.9
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 3.9e-50 201.8 159 63.5
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 6.6e-50 201.1 158 63.3
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 6.6e-50 201.1 161 64.0
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 8.6e-50 200.7 159 62.3
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.1e-49 200.3 159 62.9
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 1.5e-49 199.9 159 63.5
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.6e-48 196.4 149 64.4
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 3.6e-48 195.3 159 62.3
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 3.6e-48 195.3 149 63.8
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.0e-47 193.7 159 62.3
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 4.0e-47 191.8 159 60.4
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 6.8e-47 191.0 159 60.4
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 6.8e-47 191.0 153 62.1
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.2e-46 190.3 154 62.3
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 1.2e-46 190.3 159 59.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 5.8e-46 188.0 159 60.4
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 9.8e-46 187.2 159 60.4
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 9.8e-46 187.2 148 64.2
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 2.9e-45 185.7 158 57.6
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 8.3e-45 184.1 137 65.7
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 2.7e-43 179.1 159 57.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 1.1e-41 173.7 154 57.1
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 6.8e-39 164.5 154 51.9
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 1.2e-38 163.7 154 51.9
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.5e-38 163.3 154 51.3
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.5e-38 163.3 154 51.3
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 2.0e-38 162.9 154 51.3
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 2.0e-38 162.9 154 51.3
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 4.4e-38 161.8 151 51.7
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 7.5e-38 161.0 154 52.6
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 3.7e-37 158.7 160 51.2
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 8.3e-37 157.5 151 51.7
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 1.4e-36 156.8 154 50.6
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 3.2e-36 155.6 154 51.3
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 9.2e-36 154.1 154 50.6
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.1e-32 142.9 122 56.6
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 4.0e-31 138.7 137 50.4
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.4e-30 135.6 137 51.1
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 2.2e-29 132.9 75 81.3
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 3.2e-28 129.0 143 46.9
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 4.3e-25 118.6 74 77.0
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 7.6e-22 107.8 73 69.9
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 9.9e-22 107.5 70 72.9
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 3.8e-21 105.5 61 75.4
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 6.2e-16 88.2 126 35.7
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.1e-15 85.9 126 35.7


User provided reference genes

Program Settings