Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 0.0e+00 1169.5 604 100.0
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 7.4e-211 737.6 459 80.2
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 7.4e-211 737.6 472 78.6
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.9e-206 723.0 468 77.6
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 3.7e-202 708.8 487 75.4
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 8.5e-199 697.6 468 75.2
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 3.0e-172 609.4 471 65.2
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 2.2e-170 603.2 471 65.2
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 1.3e-167 594.0 469 63.1
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 4.3e-166 589.0 469 63.1
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 9.5e-166 587.8 471 63.7
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.8e-164 583.6 471 62.8
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 7.5e-163 578.2 476 62.6
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 9.8e-163 577.8 471 61.4
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 4.9e-162 575.5 470 61.5
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 6.4e-162 575.1 460 65.4
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 4.1e-161 572.4 469 62.9
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 1.2e-160 570.9 471 61.4
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 3.1e-156 556.2 509 57.8
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 2.6e-155 553.1 508 57.7
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 3.7e-154 549.3 475 59.8
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.9e-153 547.0 451 60.5
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.2e-153 546.2 469 60.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 4.1e-153 545.8 450 60.7
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 7.0e-153 545.0 460 60.4
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 7.0e-153 545.0 424 65.3
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 9.2e-153 544.7 473 59.4
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 9.2e-153 544.7 505 58.0
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 9.2e-153 544.7 473 59.2
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 3.5e-152 542.7 503 56.7
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 6.6e-151 538.5 491 56.8
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 3.3e-150 536.2 471 58.8
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.6e-149 533.9 494 54.7
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.1e-148 531.2 262 100.0
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 5.8e-147 525.4 498 54.4
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 2.9e-146 523.1 499 56.1
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.4e-145 520.8 498 54.0
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 2.4e-145 520.0 474 57.8
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 7.8e-144 515.0 460 57.2
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.7e-143 513.8 501 54.5
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 2.3e-143 513.5 473 55.2
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 2.3e-143 513.5 471 56.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 3.9e-143 512.7 473 55.0
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 8.6e-143 511.5 471 56.3
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 1.1e-142 511.1 473 55.0
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 1.1e-142 511.1 473 55.0
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 3.3e-142 509.6 472 55.7
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 2.1e-141 506.9 471 54.6
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 8.1e-141 505.0 503 55.5
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.1e-140 504.6 470 55.5
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 1.8e-140 503.8 425 59.8
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.8e-140 503.8 520 51.5
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 2.4e-140 503.4 473 55.2
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.4e-140 503.4 473 55.4
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 4.0e-140 502.7 475 56.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 4.4e-139 499.2 474 55.9
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 4.9e-138 495.7 472 55.9
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 6.4e-138 495.4 471 54.8
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 7.1e-137 491.9 472 54.7
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 7.1e-137 491.9 401 61.1
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 6.0e-136 488.8 472 54.2
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 7.8e-136 488.4 472 53.4
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 8.7e-135 485.0 455 55.4
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 6.2e-133 478.8 471 53.7
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 1.4e-132 477.6 476 52.3
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 9.0e-132 474.9 479 54.1
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 4.3e-126 456.1 403 58.3
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 2.1e-125 453.8 425 55.3
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 1.8e-124 450.7 428 55.1
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 1.7e-122 444.1 438 53.9
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 8.7e-119 431.8 473 48.4
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 2.5e-118 430.3 407 57.0
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 3.7e-117 426.4 473 49.5
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 3.1e-116 423.3 498 47.4
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 7.6e-115 418.7 461 50.5
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 3.2e-113 413.3 470 49.8
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 5.5e-113 412.5 477 50.1
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 8.7e-111 405.2 340 61.5
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 5.6e-110 402.5 482 47.1
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 7.1e-105 385.6 532 42.7
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 9.3e-105 385.2 512 43.8
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 1.8e-103 380.9 475 46.9
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 3.3e-102 376.7 406 48.8
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 3.9e-95 353.2 350 52.9
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.5e-89 334.0 483 44.3
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 2.2e-82 310.8 728 35.7
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 3.8e-82 310.1 498 41.4
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 7.2e-81 305.8 418 42.8
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.0e-75 287.7 466 41.4
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.5e-74 282.7 352 45.5
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.5e-74 282.7 352 45.5
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.5e-70 271.6 265 55.1
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 1.7e-69 268.1 262 53.8
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 1.0e-58 232.3 186 62.9
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 1.6e-56 224.9 480 32.5
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 6.1e-56 223.0 263 47.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 1.5e-49 201.8 195 53.8
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 8.3e-45 186.0 242 46.3
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 5.6e-41 173.3 167 52.1
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 2.2e-37 161.4 194 49.0
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 1.6e-35 155.2 201 45.3
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 8.1e-32 142.9 241 39.0
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.2e-27 129.0 106 56.6
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 4.6e-27 127.1 162 44.4
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 6.0e-27 126.7 478 26.8
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 6.6e-26 123.2 200 35.5
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 6.8e-23 113.2 167 38.9
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 8.4e-21 106.3 114 46.5
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 1.8e-15 88.6 84 53.6
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 6.4e-13 80.1 96 45.8
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 2.6e-06 58.2 121 37.2


User provided reference genes

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