Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045102 Camellia sinensis var. sinensis HOM05D028785 ORTHO05D008628 1.4e-210 736.1 401 100.0
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.7e-38 164.5 222 47.3
CSS0049832 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 8.8e-35 152.1 146 54.1
CSS0026430 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.6e-34 150.6 153 51.6
CSS0016753 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 4.8e-33 146.4 168 48.8
CSS0043392 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 6.3e-33 146.0 157 50.3
CSS0008770 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-32 145.2 203 46.3
CSS0034888 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 4.1e-32 143.3 168 47.0
CSS0031415 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 5.4e-32 142.9 157 49.0
CSS0040098 Camellia sinensis var. sinensis HOM05D028785 ORTHO05D008628 1.3e-30 138.3 122 63.9
CSS0021965 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D000589 2.9e-30 137.1 157 48.4
CSS0022264 Camellia sinensis var. sinensis HOM05D028785 ORTHO05D008628 5.0e-30 136.3 123 64.2
CSS0039678 Camellia sinensis var. sinensis HOM05D028785 ORTHO05D008628 4.2e-29 133.3 122 62.3
CSS0028595 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.3e-27 127.5 75 77.3
CSS0036293 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.2e-25 120.9 75 73.3
CSS0014448 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 5.4e-24 116.3 75 72.0
CSS0022997 Camellia sinensis var. sinensis HOM05D059555 ORTHO05D110796 1.6e-23 114.8 105 56.2
CSS0032368 Camellia sinensis var. sinensis HOM05D059555 ORTHO05D110490 1.6e-23 114.8 105 56.2
CSS0049846 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 2.3e-19 100.9 74 67.6
CSS0044758 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.6e-15 88.2 63 68.3
QL08p004401 Quercus lobata HOM05D000047 ORTHO05D000589 2.0e-15 87.8 74 48.6
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 5.9e-15 86.3 73 52.1
AUR62026412 Chenopodium quinoa HOM05D009273 ORTHO05D011122 1.1e-13 82.0 73 50.7
AUR62038327 Chenopodium quinoa HOM05D009273 ORTHO05D011122 1.1e-13 82.0 73 50.7
AUR62036961 Chenopodium quinoa HOM05D009273 ORTHO05D000589 2.5e-13 80.9 72 50.0
AUR62025784 Chenopodium quinoa HOM05D010410 ORTHO05D011122 1.5e-10 71.6 69 47.8
Dinv10786 Davidia involucrata HOM05D000047 ORTHO05D000589 2.9e-09 67.4 63 47.6
Sopen12g008250 Solanum pennellii HOM05D000047 ORTHO05D000589 6.0e-07 59.7 239 24.3
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-06 58.9 240 27.1
TAR697G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000589 1.0e-06 58.9 70 38.6
Sopen11g022800 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-06 58.5 74 36.5
CSS0045513 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.7e-06 58.2 37 67.6
Sopen01g044610 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.2 74 36.5
Sopen11g010420 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.2 74 36.5
PGR031G2581 Punica granatum HOM05D000047 ORTHO05D000589 2.3e-06 57.8 68 36.8
Sopen05g013770 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-06 57.4 239 25.9
Sopen12g026490 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-06 57.4 68 35.3
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 3.9e-06 57.0 68 35.3
PGR042G3850 Punica granatum HOM05D000047 ORTHO05D000589 5.0e-06 56.6 68 35.3
PSO017G7178 Papaver somniferum HOM05D000047 ORTHO05D000589 6.6e-06 56.2 67 35.8
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 6.6e-06 56.2 69 36.2
Sopen12g017970 Solanum pennellii HOM05D000047 ORTHO05D000589 8.6e-06 55.8 107 32.7


User provided reference genes

Program Settings