Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045099 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 2.4e-36 154.8 72 100.0
CSS0035901 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 5.6e-33 143.7 72 90.3
CSS0008037 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 7.4e-33 143.3 71 91.5
CSS0038597 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 7.4e-33 143.3 71 91.5
CSS0035075 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.3e-32 142.5 72 90.3
CSS0010490 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 3.1e-31 137.9 68 91.2
CSS0013413 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 4.2e-28 127.5 68 83.8
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.3e-24 115.9 71 73.2
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.4e-23 112.5 71 69.0
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 2.4e-23 111.7 71 66.2
CSS0024795 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 5.3e-23 110.5 71 64.8
CSS0041464 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 5.3e-23 110.5 71 64.8
Rhsim01G0119700 Rhododendron simsii HOM05D000107 ORTHO05D003213 5.0e-21 104.0 71 66.2
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 4.2e-20 100.9 66 66.7
CSS0003322 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
CSS0012803 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
CSS0024740 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
CSS0032482 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
CSS0047068 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
CSS0048301 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-16 88.2 71 57.7
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-16 87.4 71 59.2
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 3.1e-15 84.7 71 54.9
Rhsim01G0128800 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-15 83.2 71 52.1
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-14 82.0 71 52.1
Rhsim10G0071800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-14 82.0 71 52.1
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-14 82.0 71 52.1
CSS0014387 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-14 81.6 71 54.9
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-14 80.9 71 50.7
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-13 79.0 71 46.5
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-13 79.0 71 49.3
Rhsim10G0071900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-12 74.7 69 49.3
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.4e-12 73.2 66 54.5
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.1e-10 67.4 71 43.7
Rhsim11G0005900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.1e-10 67.4 71 43.7
QL01p005110 Quercus lobata HOM05D000107 ORTHO05D000062 4.3e-09 64.3 74 43.2
Rhsim10G0126500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-09 64.3 71 42.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 9.7e-09 63.2 69 42.0
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 9.7e-09 63.2 69 42.0
CANSAT80G1283 Cannabis sativa HOM05D013174 ORTHO05D015289 9.7e-09 63.2 69 42.0
Migut.K00946 Erythranthe guttata HOM05D000107 ORTHO05D003213 2.8e-08 61.6 61 41.0
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 61.6 71 43.7
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 61.6 71 43.7
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 61.6 71 42.3
Hund24116 Selenicereus undatus HOM05D006468 ORTHO05D006908 2.8e-08 61.6 68 39.7
Aqoxy2G02171 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 4.8e-08 60.8 72 43.1
Migut.O00078 Erythranthe guttata HOM05D000107 ORTHO05D000062 4.8e-08 60.8 69 37.7
Hund01184 Selenicereus undatus HOM05D000107 ORTHO05D006908 4.8e-08 60.8 68 39.7
Aqoxy6G01994 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.3e-08 60.5 72 43.1
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-08 60.1 69 39.1
Rhsim12G0007200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-07 59.3 70 41.4
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-07 58.9 69 43.5
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-07 58.9 69 43.5
Nitab4.5_0000757g0030 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.8e-07 58.9 69 39.1
PSO729G0206 Papaver somniferum HOM05D000107 ORTHO05D000062 1.8e-07 58.9 70 40.0
RhsimUnG0018000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 73 39.7
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-07 58.5 69 44.9
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 58.5 69 39.1
Solyc11g044933.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.4e-07 58.5 70 38.6
CANSAT56G0128 Cannabis sativa HOM05D024511 ORTHO05D003213 4.1e-07 57.8 69 34.8
CANSAT56G3353 Cannabis sativa HOM05D024511 ORTHO05D003213 4.1e-07 57.8 69 34.8
Prupe.1G266000 Prunus persica HOM05D000107 ORTHO05D000062 4.1e-07 57.8 69 43.5
RcHm_v2.0_Chr4g0414991 Rosa chinensis HOM05D000107 ORTHO05D003213 4.1e-07 57.8 70 44.3
VMungo0540G0166 Vigna mungo HOM05D044776 ORTHO05D003213 4.1e-07 57.8 74 41.9
VMungo1309G1266 Vigna mungo HOM05D000107 ORTHO05D003213 4.1e-07 57.8 74 41.9
Atru.chr13.1787 Acer truncatum HOM05D000107 ORTHO05D003213 5.3e-07 57.4 71 40.8
Atru.chr13.1791 Acer truncatum HOM05D000107 ORTHO05D003213 5.3e-07 57.4 71 40.8
CANSAT25G1518 Cannabis sativa HOM05D000107 ORTHO05D000062 5.3e-07 57.4 70 34.3
CANSAT80G0114 Cannabis sativa HOM05D000107 ORTHO05D000062 5.3e-07 57.4 69 36.2
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-07 57.4 61 49.2
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-07 57.4 61 49.2
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-07 57.4 61 49.2
Ah.10g024720 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.9e-07 57.0 71 43.7
CAN.G50.3 Capsicum annuum HOM05D003120 ORTHO05D003568 6.9e-07 57.0 69 40.6
Hma1.2p1_1229F.1_g268720 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 6.9e-07 57.0 74 37.8
Oeu027214.1 Olea europaea HOM05D000107 ORTHO05D003213 6.9e-07 57.0 69 39.1
CAN.G172.3 Capsicum annuum HOM05D022282 ORTHO05D017747 9.1e-07 56.6 71 35.2
AUR62024081 Chenopodium quinoa HOM05D003888 ORTHO05D003213 9.1e-07 56.6 59 44.1
Ciclev10003481m.g Citrus clementina HOM05D000107 ORTHO05D003213 9.1e-07 56.6 74 43.2
Hma1.2p1_1033F.1_g250230 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 9.1e-07 56.6 69 43.5
Peaxi162Scf00106g00075 Petunia axillaris HOM05D000107 ORTHO05D003213 9.1e-07 56.6 69 39.1
VMungo0251G1001 Vigna mungo HOM05D000028 ORTHO05D001343 9.1e-07 56.6 74 39.2
Atru.chr3.1417 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-06 56.2 69 40.6
AUR62022287 Chenopodium quinoa HOM05D000107 ORTHO05D003213 1.2e-06 56.2 58 44.8
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-06 56.2 69 39.1
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 55.8 69 42.0
Rhsim01G0140400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 55.8 42 57.1
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 55.8 69 43.5
Rhsim09G0073600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 55.8 74 37.8
TAR230G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 1.5e-06 55.8 69 42.0
TAR344G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-06 55.8 69 42.0
CANSAT25G3813 Cannabis sativa HOM05D054931 ORTHO05D003213 2.0e-06 55.5 69 34.8
Nitab4.5_0005820g0060 Nicotiana tabacum HOM05D003120 ORTHO05D010952 2.0e-06 55.5 69 37.7
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-06 55.5 69 42.0
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-06 55.5 69 42.0
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-06 55.5 69 43.5
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-06 55.5 69 43.5
VMungo0331G0246 Vigna mungo HOM05D000107 ORTHO05D003213 2.0e-06 55.5 74 40.5
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 2.6e-06 55.1 70 38.6
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 2.6e-06 55.1 70 38.6
CANSAT56G1321 Cannabis sativa HOM05D024511 ORTHO05D003213 2.6e-06 55.1 69 33.3
CANSAT56G2086 Cannabis sativa HOM05D024511 ORTHO05D003213 2.6e-06 55.1 69 33.3
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 69 43.5
CANSAT80G1036 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 69 36.2
AUR62040068 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 59 44.1
COL.COLO4_24166 Corchorus olitorius HOM05D000107 ORTHO05D003213 2.6e-06 55.1 70 37.1
ECA232G2916 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.6e-06 55.1 69 42.0
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 2.6e-06 55.1 69 44.9
Atru.chr2.1683 Acer truncatum HOM05D000107 ORTHO05D000062 3.4e-06 54.7 72 37.5
CANSAT78G0770 Cannabis sativa HOM05D000107 ORTHO05D000062 3.4e-06 54.7 70 32.9
Ciclev10010251m.g Citrus clementina HOM05D000107 ORTHO05D003213 3.4e-06 54.7 71 40.8
Ciclev10013614m.g Citrus clementina HOM05D000107 ORTHO05D000062 3.4e-06 54.7 71 36.6
Ciclev10030123m.g Citrus clementina HOM05D000107 ORTHO05D000062 3.4e-06 54.7 71 36.6
Psat3g162080 Pisum sativum HOM05D000107 ORTHO05D003213 3.4e-06 54.7 69 36.2
Atru.chr4.799 Acer truncatum HOM05D000107 ORTHO05D000062 4.5e-06 54.3 72 37.5
CANSAT01G1055 Cannabis sativa HOM05D000107 ORTHO05D000062 4.5e-06 54.3 70 32.9
CANSAT54G2011 Cannabis sativa HOM05D000107 ORTHO05D000062 4.5e-06 54.3 69 37.7
CANSAT56G2540 Cannabis sativa HOM05D000107 ORTHO05D000062 4.5e-06 54.3 69 37.7
AUR62024141 Chenopodium quinoa HOM05D007123 ORTHO05D003213 4.5e-06 54.3 47 48.9
ECA232G4762 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.5e-06 54.3 69 39.1
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.5e-06 54.3 69 42.0
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.5e-06 54.3 74 39.2
Oeu062448.1 Olea europaea HOM05D000107 ORTHO05D003213 4.5e-06 54.3 69 39.1
Atru.chr11.780 Acer truncatum HOM05D000107 ORTHO05D000062 5.9e-06 53.9 72 37.5
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.9e-06 53.9 71 39.4
CANSAT54G1543 Cannabis sativa HOM05D000107 ORTHO05D000062 5.9e-06 53.9 70 32.9
CANSAT71G0016 Cannabis sativa HOM05D000107 ORTHO05D000062 5.9e-06 53.9 70 32.9
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 5.9e-06 53.9 69 43.5
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 5.9e-06 53.9 61 37.7
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 5.9e-06 53.9 72 37.5
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 53.9 71 40.8
RhsimUnG0041600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 53.9 73 38.4
Aqoxy2G01646 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.7e-06 53.5 72 38.9
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.7e-06 53.5 69 42.0
Nitab4.5_0006332g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 7.7e-06 53.5 70 41.4
Oeu004802.1 Olea europaea HOM05D000107 ORTHO05D003213 7.7e-06 53.5 69 39.1
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 7.7e-06 53.5 61 45.9


User provided reference genes

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