Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045068 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 3.4e-53 211.5 112 100.0
CSS0040789 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 1.0e-25 120.2 107 68.2
CSS0017680 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 1.6e-21 106.3 107 59.8
CSS0034807 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D000378 2.2e-20 102.4 75 74.7
CSS0013023 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 6.5e-20 100.9 107 59.8
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-15 85.1 78 56.4
CSS0016872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 5.9e-13 77.8 70 58.6
CSS0044219 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D008835 2.9e-12 75.5 60 61.7
Thhalv10024067m.g Eutrema salsugineum HOM05D000691 ORTHO05D000378 8.0e-10 67.4 64 51.6
Oeu008229.1 Olea europaea HOM05D000691 ORTHO05D000378 1.4e-09 66.6 74 44.6
AL3G47720 Arabidopsis lyrata HOM05D000691 ORTHO05D000378 5.2e-09 64.7 67 49.3
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 6.8e-09 64.3 69 47.8
Thhalv10023044m.g Eutrema salsugineum HOM05D000691 ORTHO05D000378 1.2e-08 63.5 67 50.7
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-08 63.5 69 47.8
Hma1.2p1_0637F.1_g193600 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 1.2e-08 63.5 67 49.3
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 2.0e-08 62.8 65 50.8
Oeu053090.1 Olea europaea HOM05D000691 ORTHO05D000378 2.6e-08 62.4 61 49.2
ClCG11G007310 Citrullus lanatus HOM05D000691 ORTHO05D000378 7.5e-08 60.8 64 48.4
Oeu027794.2 Olea europaea HOM05D000691 ORTHO05D000378 7.5e-08 60.8 61 45.9
CsaV3_6G009880 Cucumis sativus L. HOM05D000691 ORTHO05D000378 9.8e-08 60.5 70 42.9
CsaV3_UNG240600 Cucumis sativus L. HOM05D000691 ORTHO05D000378 9.8e-08 60.5 70 42.9
Sp6g09660 Schrenkiella parvula HOM05D000675 ORTHO05D000378 9.8e-08 60.5 67 50.7
Sp7g04980 Schrenkiella parvula HOM05D000691 ORTHO05D000378 9.8e-08 60.5 67 47.8
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 1.3e-07 60.1 60 50.0
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 2.2e-07 59.3 68 44.1
FvH4_6g33011 Fragaria vesca HOM05D000691 ORTHO05D000378 2.2e-07 59.3 60 51.7
SHI25740 Sapria himalayana HOM05D000691 ORTHO05D000378 2.2e-07 59.3 59 49.2
SHI01503 Sapria himalayana HOM05D000691 ORTHO05D000378 2.8e-07 58.9 59 45.8
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 3.7e-07 58.5 117 35.9
Hma1.2p1_0177F.1_g077930 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.7e-07 58.5 59 47.5
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 3.7e-07 58.5 73 39.7
SHI32154 Sapria himalayana HOM05D000691 ORTHO05D000378 4.8e-07 58.2 68 41.2
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 6.3e-07 57.8 71 42.3
FvH4_6g19301 Fragaria vesca HOM05D000691 ORTHO05D000378 8.3e-07 57.4 64 48.4
SHI46406 Sapria himalayana HOM05D000691 ORTHO05D000378 8.3e-07 57.4 80 38.8
Oeu030414.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-06 57.0 61 45.9
SHI01000 Sapria himalayana HOM05D000691 ORTHO05D000378 1.1e-06 57.0 66 42.4
SHI27207 Sapria himalayana HOM05D000691 ORTHO05D000378 1.4e-06 56.6 59 45.8
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 1.8e-06 56.2 119 36.1
SHI03454 Sapria himalayana HOM05D000691 ORTHO05D000378 1.8e-06 56.2 63 44.4
SHI06326 Sapria himalayana HOM05D000691 ORTHO05D000378 1.8e-06 56.2 65 40.0
SHI14326 Sapria himalayana HOM05D000691 ORTHO05D000378 2.4e-06 55.8 66 39.4
SHI27734 Sapria himalayana HOM05D000691 ORTHO05D000378 2.4e-06 55.8 61 47.5
SHI00389 Sapria himalayana HOM05D000691 ORTHO05D000378 3.1e-06 55.5 70 40.0
Hma1.2p1_0021F.1_g014270 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 4.1e-06 55.1 61 44.3
SHI22708 Sapria himalayana HOM05D000691 ORTHO05D000378 4.1e-06 55.1 66 37.9
SHI32206 Sapria himalayana HOM05D000004 ORTHO05D000378 4.1e-06 55.1 59 42.4
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 5.4e-06 54.7 119 36.1
SHI01718 Sapria himalayana HOM05D000691 ORTHO05D000378 5.4e-06 54.7 54 46.3
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.4e-06 54.7 85 41.2
Hma1.2p1_0370F.1_g137540 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 7.0e-06 54.3 63 41.3
SHI27225 Sapria himalayana HOM05D000691 ORTHO05D000378 7.0e-06 54.3 58 44.8
Oeu039205.1 Olea europaea HOM05D000691 ORTHO05D000378 9.1e-06 53.9 61 42.6
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.1e-06 53.9 67 43.3


User provided reference genes

Program Settings