Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.6e-234 813.1 416 100.0
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 3.0e-195 685.3 415 83.4
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 2.4e-192 675.6 415 82.4
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.1e-184 650.2 415 77.6
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 5.0e-174 614.8 416 75.7
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 8.5e-174 614.0 415 74.0
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 8.5e-174 614.0 415 74.0
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 9.4e-173 610.5 406 74.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.5e-170 600.9 410 73.4
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.8e-169 598.2 416 74.0
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 8.2e-169 597.4 416 74.0
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.4e-168 595.9 417 73.4
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.1e-168 595.5 415 73.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.1e-168 595.1 405 75.6
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 5.3e-168 594.7 416 72.8
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 2.5e-165 585.9 408 72.1
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.2e-164 583.6 402 72.9
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 6.1e-164 581.3 413 70.7
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 6.8e-163 577.8 416 69.2
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 7.5e-162 574.3 403 71.2
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.2e-161 572.8 410 70.5
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.2e-161 572.8 415 71.3
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 2.8e-161 572.4 397 72.5
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.8e-161 572.4 417 68.1
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 9.1e-160 567.4 402 72.4
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.5e-157 560.1 417 67.4
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 9.5e-157 557.4 402 68.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 9.5e-157 557.4 417 66.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.7e-156 555.8 405 68.4
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 6.1e-156 554.7 415 68.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 8.0e-156 554.3 420 67.6
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 1.8e-155 553.1 417 68.6
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 4.0e-155 552.0 400 69.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.2e-154 550.4 413 67.6
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.5e-154 550.1 420 66.7
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.6e-154 549.3 415 66.0
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 9.8e-154 547.4 416 65.9
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.2e-153 546.2 415 66.7
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 2.8e-153 545.8 415 64.8
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 6.3e-153 544.7 417 67.4
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 6.3e-153 544.7 409 66.0
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.4e-152 542.7 406 66.7
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 4.1e-152 542.0 412 65.8
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 5.4e-152 541.6 414 66.9
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 9.2e-152 540.8 405 66.7
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.6e-151 540.0 412 65.5
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.0e-150 537.3 402 68.9
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.0e-150 537.3 376 73.1
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.9e-150 535.8 404 67.1
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 3.8e-150 535.4 407 67.3
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 5.0e-150 535.0 415 66.3
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 5.6e-149 531.6 404 67.3
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.6e-148 530.0 404 64.6
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 8.0e-148 527.7 400 67.0
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.0e-147 527.3 407 66.8
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.4e-147 526.9 416 65.1
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 8.9e-147 524.2 413 64.2
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.5e-146 523.5 414 62.8
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.7e-146 521.5 417 64.5
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 5.7e-146 521.5 417 62.1
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 7.5e-146 521.2 411 63.5
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 7.5e-146 521.2 376 69.7
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.3e-145 520.4 447 61.1
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 2.2e-145 519.6 413 64.4
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 2.9e-145 519.2 414 64.5
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.7e-145 518.8 416 64.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.4e-144 516.9 413 64.6
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.8e-144 516.5 416 64.2
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 1.8e-144 516.5 427 62.8
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 2.4e-144 516.2 414 63.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 4.1e-144 515.4 413 63.2
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 4.1e-144 515.4 380 67.9
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 9.2e-144 514.2 413 62.7
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.3e-142 510.4 417 63.3
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.3e-142 509.6 414 63.0
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.2e-140 503.8 360 69.4
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.2e-138 497.3 388 65.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 5.4e-136 488.4 331 74.0
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 4.6e-135 485.3 409 62.6
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.6e-132 475.7 434 59.0
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.2e-129 466.5 511 53.6
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.4e-128 463.0 403 61.8
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 5.1e-126 455.3 331 70.1
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.5e-125 453.8 334 68.9
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.5e-122 443.7 357 60.2
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 7.6e-122 441.4 388 57.5
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 9.2e-120 434.5 400 56.5
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 2.7e-119 433.0 295 74.9
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 5.1e-118 428.7 329 65.7
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 3.8e-113 412.5 295 69.8
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.2e-112 409.1 410 52.7
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.3e-107 392.1 295 65.4
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 7.1e-104 381.7 241 80.1
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.6e-100 370.5 265 71.3
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-99 367.9 265 70.2
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 9.0e-99 364.8 363 52.9
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.2e-98 364.4 405 49.1
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 6.4e-97 358.6 413 47.2
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 9.3e-96 354.8 413 45.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 3.8e-89 332.8 238 71.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.0e-87 325.5 332 52.1
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 3.7e-84 316.2 419 43.4
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.2e-57 227.3 147 83.7
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.2e-53 214.9 259 46.7
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.8e-52 209.5 131 79.4
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.1e-51 208.4 163 65.0
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.1e-48 198.4 154 63.0
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.7e-44 184.5 167 58.1
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 2.5e-40 170.6 146 55.5
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.5e-34 150.2 96 78.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.5e-32 144.8 96 72.9
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.5e-32 144.1 123 69.9
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 4.7e-31 139.8 110 63.6
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.4e-27 127.5 91 67.0
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.2e-23 115.2 80 75.0
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.7e-09 68.2 50 64.0
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 6.6e-09 66.2 47 72.3


User provided reference genes

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