Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045025 Camellia sinensis var. sinensis HOM05D003699 ORTHO05D038342 1.2e-71 273.1 136 100.0
Dinv28516 Davidia involucrata HOM05D003699 ORTHO05D004474 2.0e-23 112.8 101 63.4
CiPaw.04G064600 Carya illinoinensis HOM05D003699 ORTHO05D004474 8.8e-19 97.4 102 59.8
Hma1.2p1_0488F.1_g163830 Hydrangea macrophylla HOM05D003699 ORTHO05D004474 1.7e-17 93.2 102 55.9
Cfa008249 Carpinus fangiana HOM05D003699 ORTHO05D004474 3.7e-17 92.0 102 56.9
Nn6g34343 Nelumbo nucifera HOM05D003699 ORTHO05D004474 1.4e-16 90.1 101 53.5
Actinidia32916 Actinidia chinensis HOM05D003699 ORTHO05D004474 2.4e-16 89.4 103 53.4
Haze_13802 Corylus avellana HOM05D003699 ORTHO05D004474 3.1e-16 89.0 102 55.9
vmacro06753 Vaccinium macrocarpon HOM05D003699 ORTHO05D004474 7.7e-15 84.3 103 50.5
Cc02_g03690 Coffea canephora HOM05D003699 ORTHO05D004474 1.7e-14 83.2 101 52.5
TAR375G0673 Trochodendron aralioides HOM05D003699 ORTHO05D004474 1.7e-14 83.2 101 49.5
Cpa.g.sc4.178 Carica papaya HOM05D003699 ORTHO05D004474 2.9e-14 82.4 107 49.5
Nn1g01150 Nelumbo nucifera HOM05D003699 ORTHO05D004474 8.5e-14 80.9 101 48.5
QL12p039078 Quercus lobata HOM05D003699 ORTHO05D004474 1.9e-13 79.7 104 50.0
Rhsim03G0173500 Rhododendron simsii HOM05D003699 ORTHO05D004474 7.2e-13 77.8 103 47.6
Migut.F00407 Erythranthe guttata HOM05D003699 ORTHO05D004474 3.6e-12 75.5 101 46.5
arahy.Tifrunner.gnm1.ann1.8Y7MPM Arachis hypogaea HOM05D003699 ORTHO05D004474 3.9e-11 72.0 103 43.7
arahy.Tifrunner.gnm1.ann1.VSX1SJ Arachis hypogaea HOM05D003699 ORTHO05D004474 3.9e-11 72.0 103 43.7
SalBow4G1619 Salvia bowleyana HOM05D003699 ORTHO05D004474 6.7e-11 71.2 101 49.5
arahy.Tifrunner.gnm1.ann1.68I314 Arachis hypogaea HOM05D003699 ORTHO05D004474 3.3e-10 68.9 103 41.7
Oeu030154.1 Olea europaea HOM05D003699 ORTHO05D004474 1.3e-09 67.0 101 47.5
CANSAT21G1948 Cannabis sativa HOM05D003699 ORTHO05D004474 1.1e-08 63.9 97 43.3
Lj2g0006173 Lotus japonicus HOM05D003699 ORTHO05D004474 1.4e-08 63.5 102 46.1
Phvul.004G124500 Phaseolus vulgaris HOM05D003699 ORTHO05D004474 1.4e-08 63.5 100 46.0
Sc19g0001790 Simmondsia chinensis HOM05D003699 ORTHO05D004474 2.4e-08 62.8 104 44.2
ATR0661G314 Amborella trichopoda HOM05D003699 ORTHO05D038342 7.0e-08 61.2 80 50.0
Glyma.16G201600 Glycine max HOM05D003699 ORTHO05D004474 3.4e-07 58.9 101 44.6
VMungo0464G0389 Vigna mungo HOM05D003699 ORTHO05D004474 4.5e-07 58.5 103 42.7
MBI04_g06627_MAGBIO Magnolia biondii HOM05D003699 ORTHO05D004474 5.9e-07 58.2 103 41.7
Eucgr.K00135 Eucalyptus grandis HOM05D003699 ORTHO05D004474 2.9e-06 55.8 106 45.3
Glyma.09G150200 Glycine max HOM05D003699 ORTHO05D004474 3.8e-06 55.5 101 42.6


User provided reference genes

Program Settings