Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.6e-76 288.1 139 100.0
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.1e-72 275.0 151 90.7
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.6e-60 236.1 150 78.7
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.8e-59 232.6 151 75.5
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 2.3e-59 232.3 138 81.9
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 2.3e-59 232.3 144 81.2
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.2e-57 225.7 145 78.6
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.8e-57 225.3 151 76.2
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.8e-57 225.3 147 75.5
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 6.3e-57 224.2 150 75.3
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.8e-56 222.6 143 74.8
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.8e-56 222.6 143 74.8
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 7.0e-56 220.7 151 74.2
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 7.0e-56 220.7 142 73.2
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 7.0e-56 220.7 143 74.1
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 9.1e-56 220.3 151 74.2
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 9.1e-56 220.3 146 74.7
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.2e-55 219.9 142 74.6
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 3.5e-55 218.4 114 83.3
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 4.5e-55 218.0 148 76.4
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.0e-54 216.9 147 74.1
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 1.3e-54 216.5 144 72.9
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.3e-54 216.5 144 73.6
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.7e-54 216.1 148 70.3
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 1.7e-54 216.1 137 75.2
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.3e-54 215.7 152 73.0
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 2.9e-54 215.3 143 73.4
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 2.9e-54 215.3 145 71.7
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 2.9e-54 215.3 144 73.6
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 3.8e-54 214.9 144 72.2
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 3.8e-54 214.9 144 72.2
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 3.8e-54 214.9 140 72.1
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 3.8e-54 214.9 140 72.9
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 5.0e-54 214.5 144 74.3
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 5.0e-54 214.5 149 71.1
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 6.6e-54 214.2 144 73.6
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 6.6e-54 214.2 144 73.6
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 6.6e-54 214.2 144 73.6
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.1e-53 213.4 145 72.4
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.5e-53 213.0 144 72.2
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.5e-53 213.0 145 74.5
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.9e-53 212.6 142 73.9
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 2.5e-53 212.2 142 73.9
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.5e-53 212.2 144 71.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.5e-53 212.2 144 72.9
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.5e-53 212.2 144 71.5
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.5e-53 212.2 144 72.9
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 3.3e-53 211.8 152 70.4
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 5.6e-53 211.1 146 72.6
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 7.2e-53 210.7 145 71.7
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 9.5e-53 210.3 144 71.5
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 9.5e-53 210.3 151 70.2
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.6e-52 209.5 141 73.0
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.6e-52 209.5 136 75.0
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 2.1e-52 209.1 143 73.4
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.8e-52 208.8 150 70.0
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 3.6e-52 208.4 145 74.5
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 6.1e-52 207.6 143 68.5
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 8.0e-52 207.2 150 70.0
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 1.0e-51 206.8 151 68.9
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.4e-51 206.5 144 72.9
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.4e-51 206.5 152 69.1
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.4e-51 206.5 151 69.5
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.4e-51 206.5 145 71.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.8e-51 206.1 143 71.3
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 2.3e-51 205.7 132 72.7
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.0e-51 205.3 114 81.6
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 4.0e-51 204.9 137 73.0
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 4.0e-51 204.9 146 69.2
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.2e-51 204.5 147 69.4
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 5.2e-51 204.5 145 70.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 6.8e-51 204.1 147 69.4
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.2e-50 203.4 142 70.4
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.2e-50 203.4 145 70.3
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.2e-50 203.4 141 73.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.5e-50 203.0 137 73.0
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 2.0e-50 202.6 141 71.6
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.6e-50 202.2 144 72.2
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 2.6e-50 202.2 146 68.5
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.7e-50 201.1 147 68.0
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 9.8e-50 200.3 115 83.5
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 9.8e-50 200.3 145 73.1
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.3e-49 199.9 146 71.2
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 2.2e-49 199.1 144 71.5
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.9e-49 198.7 145 72.4
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.9e-49 198.7 146 70.5
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 2.9e-49 198.7 142 70.4
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 4.9e-49 198.0 114 77.2
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 6.4e-49 197.6 113 76.1
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 8.3e-49 197.2 145 71.7
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.4e-48 196.4 142 67.6
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.4e-48 195.7 132 71.2
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 2.4e-48 195.7 142 66.9
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.2e-48 195.3 138 70.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 5.4e-48 194.5 141 68.8
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 5.4e-48 194.5 136 69.9
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 1.2e-47 193.4 148 66.2
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.2e-47 193.4 137 69.3
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.6e-47 193.0 149 65.1
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.5e-47 191.8 146 68.5
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 3.0e-46 188.7 136 69.1
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 8.6e-46 187.2 140 67.9
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.1e-45 186.8 148 62.8
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 8.0e-44 180.6 139 65.5
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-43 179.9 113 71.7
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 1.8e-43 179.5 137 64.2
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.5e-42 176.4 145 63.4
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.6e-42 175.6 120 75.8
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 4.4e-42 174.9 148 60.8
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 5.8e-42 174.5 146 60.3
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.0e-39 166.0 96 77.1
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.6e-39 164.9 84 84.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.3e-38 162.5 90 78.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.0e-38 162.2 120 67.5
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 4.7e-36 154.8 86 76.7
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 2.3e-35 152.5 119 70.6
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.5e-34 149.8 109 71.6
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 5.8e-34 147.9 121 66.9
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.1e-32 143.7 119 58.8
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.2e-31 140.2 117 65.0
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.6e-30 134.0 114 69.3
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.9e-29 132.9 117 62.4
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 2.8e-28 129.0 124 54.0
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 1.1e-27 127.1 122 61.5
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 9.9e-26 120.6 141 50.4
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.2e-25 119.4 91 70.3
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 5.4e-24 114.8 124 49.2
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 2.2e-17 92.8 90 56.7
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 2.9e-17 92.4 91 45.1
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.6e-15 86.7 159 39.6
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.3e-13 78.6 82 62.2
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 3.1e-11 72.4 73 63.0
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 5.3e-11 71.6 73 63.0
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.0e-10 69.7 69 63.8


User provided reference genes

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