Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 2.2e-139 499.2 303 100.0
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 4.6e-68 262.3 294 53.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 7.1e-53 211.8 259 54.8
CSS0002524 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D111562 3.7e-41 172.9 153 64.7
CSS0008930 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D110104 7.6e-39 165.2 160 59.4
CSS0046477 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D112495 2.6e-31 140.2 152 55.9
CSS0023846 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D112692 4.2e-29 132.9 149 55.7
CSS0007931 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D111137 1.8e-27 127.5 118 59.3
CSS0044541 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D109434 1.9e-26 124.0 152 52.6
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-21 107.5 232 36.6
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.5e-21 107.1 232 36.6
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.5e-21 107.1 236 36.0
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.2e-21 106.3 232 36.6
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.2e-21 105.5 236 36.4
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-20 104.0 232 36.2
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-20 103.2 236 35.6
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-20 103.2 236 35.6
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-20 103.2 236 35.6
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-20 103.2 236 35.6
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-19 101.7 232 35.3
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-19 99.4 236 34.7
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-19 99.4 315 29.2
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.7e-18 95.9 286 30.4
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.2e-17 92.0 303 28.4
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-17 92.0 290 31.0
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-16 89.7 279 30.8
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.9e-16 89.0 290 30.7
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-15 87.4 290 30.7
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 2.2e-14 84.0 298 27.9
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-14 84.0 276 30.1
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-14 83.6 295 29.8
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.1e-12 75.9 320 26.9
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.9e-11 73.2 298 26.5
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 6.7e-11 72.4 277 31.8
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-10 70.9 293 24.9
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.4e-10 68.9 237 29.5
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.7e-09 67.8 189 35.4
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-09 67.0 238 28.2
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-09 66.6 293 24.2
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 4.5e-07 59.7 259 25.5
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.7e-07 58.9 160 29.4
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-06 58.5 145 31.7
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-06 57.4 58 50.0
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.2e-06 57.4 264 26.5
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-06 57.0 129 31.0
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.8e-06 56.6 278 23.7
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.0e-06 56.2 58 48.3
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.0e-06 56.2 278 23.4
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.5e-06 55.8 58 48.3


User provided reference genes

Program Settings