Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044981 Camellia sinensis var. sinensis HOM05D005399 ORTHO05D006347 1.7e-174 615.9 313 100.0
Actinidia34263 Actinidia chinensis HOM05D005399 ORTHO05D006347 1.0e-134 483.8 303 80.9
vmacro06433 Vaccinium macrocarpon HOM05D005399 ORTHO05D006347 3.1e-120 435.6 303 71.9
Hma1.2p1_0094F.1_g047320 Hydrangea macrophylla HOM05D005399 ORTHO05D006347 3.2e-109 399.1 305 67.9
TAR629G1213 Trochodendron aralioides HOM05D005399 ORTHO05D006347 7.2e-101 371.3 303 64.7
Rhsim03G0214700 Rhododendron simsii HOM05D005399 ORTHO05D006347 9.5e-93 344.4 247 73.7
Lj3C896G2 Lonicera japonica HOM05D005399 ORTHO05D006347 6.3e-89 331.6 294 59.9
Nn3g18028 Nelumbo nucifera HOM05D005399 ORTHO05D006347 5.0e-78 295.4 305 52.1
CANSAT21G1620 Cannabis sativa HOM05D005399 ORTHO05D006347 1.1e-77 294.3 283 56.2
Ciclev10018828m.g Citrus clementina HOM05D005399 ORTHO05D006347 4.3e-77 292.4 269 57.6
Aqoxy5G00909 Aquilegia oxysepala HOM05D005399 ORTHO05D006347 5.6e-77 292.0 305 52.8
Atru.chr12.2405 Acer truncatum HOM05D005399 ORTHO05D006347 1.4e-75 287.3 258 58.5
CiPaw.05G203600 Carya illinoinensis HOM05D005399 ORTHO05D006347 2.0e-74 283.5 265 59.2
Prupe.1G170200 Prunus persica HOM05D005399 ORTHO05D006347 3.4e-74 282.7 238 60.9
MD10G1005500 Malus domestica HOM05D005399 ORTHO05D006347 4.4e-74 282.3 284 54.9
Hund09706 Selenicereus undatus HOM05D005399 ORTHO05D006347 1.4e-72 277.3 303 51.2
Duzib205G1241 Durio zibethinus HOM05D005399 ORTHO05D006347 1.9e-72 276.9 270 56.3
MD04G1021200 Malus domestica HOM05D005399 ORTHO05D006347 2.1e-71 273.5 284 53.9
PSO782G2701 Papaver somniferum HOM05D005399 ORTHO05D006347 3.0e-70 269.6 305 50.5
Thecc.03G207700 Theobroma cacao HOM05D005399 ORTHO05D006347 3.9e-70 269.2 262 56.9
QL09p007265 Quercus lobata HOM05D005399 ORTHO05D006347 5.1e-70 268.9 271 55.7
Cfa016169 Carpinus fangiana HOM05D005399 ORTHO05D006347 8.6e-70 268.1 256 58.2
Haze_00285 Corylus avellana HOM05D005399 ORTHO05D006347 2.5e-69 266.5 266 57.1
Cc11_g00230 Coffea canephora HOM05D005399 ORTHO05D006347 7.3e-69 265.0 261 55.2
RcHm_v2.0_Chr4g0412561 Rosa chinensis HOM05D005399 ORTHO05D006347 7.3e-69 265.0 266 55.3
DCAR_008979 Daucus carota HOM05D005399 ORTHO05D006347 1.2e-68 264.2 262 54.6
GSVIVG01038634001 Vitis vinifera HOM05D005399 ORTHO05D006347 1.2e-68 264.2 214 64.0
FvH4_4g12930 Fragaria vesca HOM05D005399 ORTHO05D006347 2.8e-68 263.1 247 58.3
FAN12G2064 Fragaria x ananassa HOM05D005399 ORTHO05D006347 2.8e-68 263.1 247 58.3
PSO063G2915 Papaver somniferum HOM05D005399 ORTHO05D006347 4.7e-68 262.3 305 48.9
TWI39G1122 Tripterygium wilfordii HOM05D005399 ORTHO05D006347 3.1e-67 259.6 270 54.1
Eucgr.H04750 Eucalyptus grandis HOM05D005399 ORTHO05D006347 5.2e-67 258.8 233 56.7
MSTRG.26983 Avicennia marina HOM05D005399 ORTHO05D006347 6.8e-67 258.5 272 53.7
FAN07G0819 Fragaria x ananassa HOM05D005399 ORTHO05D006347 6.8e-67 258.5 247 57.5
AUR62006012 Chenopodium quinoa HOM05D005399 ORTHO05D006347 1.2e-66 257.7 306 48.7
COL.COLO4_14362 Corchorus olitorius HOM05D005399 ORTHO05D006347 1.2e-66 257.7 263 56.3
arahy.Tifrunner.gnm1.ann1.F3K4LC Arachis hypogaea HOM05D005399 ORTHO05D006347 3.4e-66 256.1 252 53.2
Migut.F00156 Erythranthe guttata HOM05D005399 ORTHO05D006347 1.3e-65 254.2 249 57.0
Phvul.004G128800 Phaseolus vulgaris HOM05D005399 ORTHO05D006347 2.9e-65 253.1 251 55.0
Potri.012G021900 Populus trichocarpa HOM05D005399 ORTHO05D006347 2.9e-65 253.1 233 59.7
Sopen06g030090 Solanum pennellii HOM05D005399 ORTHO05D006347 3.7e-65 252.7 261 52.9
ATR1089G058 Amborella trichopoda HOM05D005399 ORTHO05D006347 4.9e-65 252.3 303 47.2
PGSC0003DMG400005917 Solanum tuberosum HOM05D005399 ORTHO05D006347 4.9e-65 252.3 278 50.7
Sabra12G0011800 Salix brachista HOM05D005399 ORTHO05D006347 1.4e-64 250.8 233 58.8
SGA_v2.0_scaffold18G08460 Striga asiatica HOM05D005399 ORTHO05D006347 1.4e-64 250.8 266 51.9
Glyma.10G094100 Glycine max HOM05D005399 ORTHO05D006347 2.4e-64 250.0 222 58.6
Nitab4.5_0000271g0170 Nicotiana tabacum HOM05D005399 ORTHO05D006347 2.4e-64 250.0 278 51.1
arahy.Tifrunner.gnm1.ann1.CBX7CP Arachis hypogaea HOM05D005399 ORTHO05D006347 3.2e-64 249.6 279 49.5
Gohir.D08G116000 Gossypium hirsutum HOM05D005399 ORTHO05D006347 3.2e-64 249.6 257 54.9
Gorai.004G124900 Gossypium raimondii HOM05D005399 ORTHO05D006347 3.2e-64 249.6 257 54.9
Ca_27344_v3 Cicer arietinum L. HOM05D005399 ORTHO05D006347 4.1e-64 249.2 234 56.0
CAN.G65.216 Capsicum annuum HOM05D005399 ORTHO05D006347 7.1e-64 248.4 261 53.3
Sabra05G0139800 Salix brachista HOM05D005399 ORTHO05D006347 7.1e-64 248.4 233 58.4
AUR62035614 Chenopodium quinoa HOM05D005399 ORTHO05D006347 2.1e-63 246.9 306 47.7
arahy.Tifrunner.gnm1.ann1.61K3C5 Arachis hypogaea HOM05D005399 ORTHO05D006347 2.7e-63 246.5 272 49.6
arahy.Tifrunner.gnm1.ann1.GD33A2 Arachis hypogaea HOM05D005399 ORTHO05D006347 2.7e-63 246.5 272 49.6
arahy.Tifrunner.gnm1.ann1.MB6KVE Arachis hypogaea HOM05D005399 ORTHO05D006347 2.7e-63 246.5 272 49.6
Glyma.14G156200 Glycine max HOM05D005399 ORTHO05D006347 2.7e-63 246.5 222 58.1
Manes.01G042700 Manihot esculenta HOM05D005399 ORTHO05D006347 7.8e-63 245.0 225 59.1
TPR.G18894 Trifolium pratense HOM05D005399 ORTHO05D006347 1.0e-62 244.6 251 53.8
Nitab4.5_0002184g0080 Nicotiana tabacum HOM05D005399 ORTHO05D006347 1.7e-62 243.8 278 50.0
Ah.09g232770 Amaranthus hybridus HOM05D005399 ORTHO05D006347 2.3e-62 243.4 304 47.4
Lj4g0025583 Lotus japonicus HOM05D005399 ORTHO05D006347 5.1e-62 242.3 253 50.6
Lalb_Chr03g0034521 Lupinus albus HOM05D005399 ORTHO05D006347 1.1e-61 241.1 242 51.2
EL10Ac3g05189 Beta vulgaris HOM05D005399 ORTHO05D006347 1.9e-61 240.4 304 46.7
Lj5g0008235 Lotus japonicus HOM05D005399 ORTHO05D006347 3.3e-61 239.6 250 51.2
VMungo1080G0063 Vigna mungo HOM05D005399 ORTHO05D006347 5.6e-61 238.8 260 52.3
Medtr5g077160 Medicago truncatula HOM05D005399 ORTHO05D006347 1.2e-60 237.7 238 53.4
Medtr1g059090 Medicago truncatula HOM05D005399 ORTHO05D006347 1.6e-60 237.3 238 52.5
SalBow1G6622 Salvia bowleyana HOM05D005399 ORTHO05D006347 1.6e-60 237.3 266 50.8
SalBow6G2741 Salvia bowleyana HOM05D005399 ORTHO05D006347 1.4e-59 234.2 269 50.6
ECA236G2916 Erigeron canadensis HOM05D005399 ORTHO05D006347 5.2e-59 232.3 258 50.0
SalBow1G5593 Salvia bowleyana HOM05D005399 ORTHO05D006347 6.8e-59 231.9 266 49.6
SalBow1G2085 Salvia bowleyana HOM05D005399 ORTHO05D006347 8.9e-59 231.5 254 51.6
PGR102G0827 Punica granatum HOM05D005399 ORTHO05D006347 1.2e-58 231.1 246 52.8
Psat2g044800 Pisum sativum HOM05D005399 ORTHO05D006347 1.1e-56 224.6 222 54.5
Gohir.A08G104400 Gossypium hirsutum HOM05D005399 ORTHO05D006347 1.6e-55 220.7 211 56.9
Lsat_1_v5_gn_7_13681 Lactuca sativa HOM05D005399 ORTHO05D006347 2.7e-55 219.9 222 55.0
HanXRQChr15g0470151 Helianthus annuus HOM05D005399 ORTHO05D006347 1.3e-54 217.6 223 54.7
VMungo0464G0254 Vigna mungo HOM05D005399 ORTHO05D006347 2.3e-54 216.9 296 45.3
HanXRQChr01g0023961 Helianthus annuus HOM05D005399 ORTHO05D006347 5.1e-54 215.7 244 51.6
THA.LOC104803340 Tarenaya hassleriana HOM05D005399 ORTHO05D006347 8.7e-54 214.9 266 45.5
Sc19g0000620 Simmondsia chinensis HOM05D005399 ORTHO05D006347 1.1e-53 214.5 253 47.0
ClCG08G014290 Citrullus lanatus HOM05D005399 ORTHO05D006347 1.9e-53 213.8 263 45.6
Sed0017875 Sechium edule HOM05D005399 ORTHO05D006347 2.5e-53 213.4 270 45.9
Cpa.g.sc13.113 Carica papaya HOM05D005399 ORTHO05D006347 3.3e-53 213.0 270 45.9
CsaV3_2G029520 Cucumis sativus L. HOM05D005399 ORTHO05D006347 1.6e-52 210.7 264 46.6
Aa31LG4G17950 Aethionema arabicum HOM05D005399 ORTHO05D006347 6.2e-52 208.8 268 42.2
Thhalv10010115m.g Eutrema salsugineum HOM05D005399 ORTHO05D006347 7.6e-50 201.8 234 46.2
MELO3C011011.2 Cucumis melo HOM05D005399 ORTHO05D006347 9.9e-50 201.4 235 48.9
Sp5g12670 Schrenkiella parvula HOM05D005399 ORTHO05D006347 2.9e-49 199.9 260 42.7
C01p30860 Brassica napus HOM05D005399 ORTHO05D006347 1.1e-48 198.0 280 41.1
BolC1t03020H Brassica oleracea HOM05D005399 ORTHO05D006347 1.1e-48 198.0 280 41.1
AL5G29160 Arabidopsis lyrata HOM05D005399 ORTHO05D006347 2.4e-48 196.8 253 43.5
BraA01t02386Z Brassica rapa HOM05D005399 ORTHO05D006347 9.3e-48 194.9 289 39.4
Os01g0702400 Oryza sativa ssp. japonica HOM05D005399 ORTHO05D006347 2.7e-47 193.4 229 47.6
CDE04G3617 Ceratophyllum demersum HOM05D005399 ORTHO05D006347 3.5e-47 193.0 223 47.5
CARHR158370 Cardamine hirsuta HOM05D005399 ORTHO05D006347 7.8e-47 191.8 228 43.0
A01p24740 Brassica napus HOM05D005399 ORTHO05D006347 1.0e-46 191.4 289 39.1
AT3G49400 Arabidopsis thaliana HOM05D005399 ORTHO05D006347 2.3e-46 190.3 253 43.1
Carub.0005s1567 Capsella rubella HOM05D005399 ORTHO05D006347 3.0e-46 189.9 236 43.6
Zm00001eb211870 Zea mays HOM05D005399 ORTHO05D006347 1.4e-35 154.5 233 41.2
Mapoly0079s0055 Marchantia polymorpha HOM05D005399 ORTHO05D006347 2.9e-33 146.7 272 37.1
Oeu037969.1 Olea europaea HOM05D005399 ORTHO05D006347 7.1e-32 142.1 110 66.4
SMO170G0037 Selaginella moellendorffii HOM05D005399 ORTHO05D006347 1.8e-30 137.5 239 37.7
Dinv29218 Davidia involucrata HOM05D005399 ORTHO05D006347 9.6e-29 131.7 86 77.9
Pp3c18_13210 Physcomitrium patens HOM05D005399 ORTHO05D006347 4.8e-28 129.4 226 37.2
AagrBONN_evm.TU.Sc2ySwM_117.1095 Anthoceros agrestis HOM05D005399 ORTHO05D006347 3.1e-27 126.7 237 35.0
Zm00001eb062490 Zea mays HOM05D005399 ORTHO05D006347 5.8e-26 122.5 145 46.2
unitig_749.g13730 Utricularia gibba HOM05D005399 ORTHO05D006347 1.8e-22 110.9 183 37.7
SHI24234 Sapria himalayana HOM05D005399 ORTHO05D006347 1.5e-21 107.8 137 46.0
CBR_g20108 Chara braunii HOM05D001969 ORTHO05D003463 1.4e-14 84.7 336 27.7
EL10As6g23691 Beta vulgaris HOM05D005399 ORTHO05D006347 1.4e-08 64.7 108 38.0
arahy.Tifrunner.gnm1.ann1.JN7TNN Arachis hypogaea HOM05D005399 ORTHO05D006347 1.4e-06 58.2 62 50.0
arahy.Tifrunner.gnm1.ann1.QKC624 Arachis hypogaea HOM05D005399 ORTHO05D006347 3.0e-06 57.0 55 54.5


User provided reference genes

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