Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.0e-156 555.8 303 100.0
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.2e-60 237.7 312 51.6
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 7.6e-55 218.4 308 49.0
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.8e-54 216.1 313 48.6
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 2.1e-49 200.3 306 47.1
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.1e-48 196.4 303 49.5
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 7.6e-39 165.2 213 53.1
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 4.9e-38 162.5 314 43.9
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.2e-36 157.9 333 39.3
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 7.9e-36 155.2 319 38.6
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 5.6e-34 149.1 312 37.5
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.3e-33 147.9 308 39.0
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 3.7e-33 146.4 323 40.9
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 2.6e-31 140.2 324 37.3
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 4.5e-31 139.4 294 39.1
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.9e-29 134.0 302 40.4
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 3.5e-28 129.8 308 37.7
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.1e-27 125.9 195 49.2
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 6.7e-27 125.6 315 37.8
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.9e-26 124.0 294 37.8
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 9.7e-26 121.7 317 36.9
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 6.9e-24 115.5 305 35.4
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.0e-24 115.2 307 36.2
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 2.6e-23 113.6 306 33.0
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 5.9e-23 112.5 308 37.0
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 3.8e-22 109.8 306 32.4
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 6.5e-22 109.0 327 35.8
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 6.5e-22 109.0 316 36.4
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 1.9e-21 107.5 300 34.3
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.5e-21 107.1 307 36.5
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 5.5e-21 105.9 297 35.4
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 9.4e-21 105.1 305 34.8
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 1.0e-19 101.7 162 46.9
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.4e-19 101.3 328 34.5
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.8e-19 100.9 293 36.5
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 6.7e-19 99.0 152 45.4
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 8.8e-19 98.6 322 31.1
Lj4P797T23 Lonicera japonica HOM05D007760 ORTHO05D008337 1.5e-18 97.8 193 39.9
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 1.5e-18 97.8 315 32.7
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.5e-18 97.8 316 32.9
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 4.3e-18 96.3 298 33.9
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 7.4e-18 95.5 137 46.0
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 1.3e-17 94.7 327 31.8
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 3.7e-17 93.2 178 39.9
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 4.8e-17 92.8 270 31.5
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 4.8e-17 92.8 300 34.3
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.8e-16 90.9 301 34.2
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.4e-16 90.5 189 44.4
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 3.1e-16 90.1 284 34.2
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 4.1e-16 89.7 328 30.8
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 6.9e-16 89.0 315 32.7
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 6.9e-16 89.0 137 45.3
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 9.1e-16 88.6 292 32.5
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.5e-15 87.8 313 34.2
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.5e-15 87.8 343 28.6
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 2.0e-15 87.4 166 41.0
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.5e-15 86.3 269 31.2
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.9e-15 85.9 162 40.7
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.9e-15 85.9 162 40.7
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 5.9e-15 85.9 321 32.4
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 7.7e-15 85.5 162 41.4
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.3e-14 84.7 256 31.2
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 2.2e-14 84.0 286 33.6
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 5.0e-14 82.8 169 39.1
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 5.0e-14 82.8 346 30.1
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 8.5e-14 82.0 299 30.8
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 1.4e-13 81.3 302 33.8
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.4e-13 81.3 183 38.3
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 1.9e-13 80.9 292 31.2
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.9e-13 80.9 296 35.8
HanXRQChr13g0386671 Helianthus annuus HOM05D022491 ORTHO05D000476 1.9e-13 80.9 317 30.0
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.5e-13 80.5 161 41.6
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 2.5e-13 80.5 316 32.0
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 2.5e-13 80.5 170 37.1
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 7.2e-13 79.0 314 33.4
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 7.2e-13 79.0 297 36.4
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.2e-12 78.2 306 33.7
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.6e-12 77.8 254 31.9
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.7e-12 76.3 297 36.0
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 6.1e-12 75.9 315 33.7
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 2.3e-11 73.9 323 29.4
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.3e-11 73.9 164 39.0
Actinidia29751 Actinidia chinensis HOM05D068263 ORTHO05D008337 3.9e-11 73.2 280 31.8
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 3.9e-11 73.2 323 29.4
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 6.7e-11 72.4 180 37.2
DCAR_009486 Daucus carota HOM05D015458 ORTHO05D008337 1.1e-10 71.6 210 31.0
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 1.5e-10 71.2 318 30.8
Actinidia37934 Actinidia chinensis HOM05D068263 ORTHO05D008337 2.6e-10 70.5 240 34.6
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 2.6e-10 70.5 197 29.9
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 5.7e-10 69.3 304 32.9
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 5.7e-10 69.3 164 37.8
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.7e-10 68.6 154 39.0
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 1.7e-09 67.8 164 34.8
Lsat_1_v5_gn_8_30660 Lactuca sativa HOM05D022491 ORTHO05D000476 2.8e-09 67.0 129 40.3
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 3.7e-09 66.6 262 28.6
EL10Ac1g02192 Beta vulgaris HOM05D030748 ORTHO05D008337 4.8e-09 66.2 307 30.3
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 4.8e-09 66.2 317 29.7
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 8.2e-09 65.5 257 30.7
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 1.4e-08 64.7 293 29.4
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.4e-08 64.7 190 34.7
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 1.8e-08 64.3 173 32.9
AUR62033901 Chenopodium quinoa HOM05D030748 ORTHO05D008337 1.8e-08 64.3 100 42.0
EL10Ac1g02191 Beta vulgaris HOM05D030748 ORTHO05D008337 3.1e-08 63.5 158 41.8
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 3.1e-08 63.5 302 29.5
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 7.0e-08 62.4 295 29.8
SGA_v2.0_scaffold47G17496 Striga asiatica HOM05D007760 ORTHO05D008337 9.1e-08 62.0 305 29.2
HanXRQChr12g0367241 Helianthus annuus HOM05D022491 ORTHO05D000476 2.0e-07 60.8 164 30.5
Lalb_Chr22g0354321 Lupinus albus HOM05D007760 ORTHO05D008337 4.5e-07 59.7 332 29.2
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 5.9e-07 59.3 85 43.5
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 7.7e-07 58.9 200 33.5
ECA233G1679 Erigeron canadensis HOM05D022491 ORTHO05D000476 3.8e-06 56.6 256 27.3


User provided reference genes

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