Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.8e-241 838.2 426 100.0
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.9e-225 784.3 426 94.6
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-219 766.5 405 95.8
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.4e-219 766.1 405 96.3
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-216 755.4 426 92.0
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-215 752.7 426 91.1
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.2e-212 740.7 426 89.0
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.8e-211 737.3 405 93.6
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-205 719.5 405 91.9
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.8e-84 316.2 180 83.3
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-47 194.9 417 32.9
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-47 193.4 418 32.1
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.3e-47 192.6 418 32.1
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.3e-47 192.6 418 31.8
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-46 191.8 418 31.8
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-46 191.0 418 31.8
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-46 191.0 418 31.8
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-46 190.7 418 33.0
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.1e-46 189.9 426 31.9
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-46 189.5 410 32.4
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.6e-45 187.2 425 31.3
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-45 186.8 417 31.7
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-45 186.8 425 31.3
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.4e-43 178.7 337 33.2
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.4e-43 178.7 337 33.2
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.4e-43 178.7 337 33.2
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.4e-43 178.7 337 33.2
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-42 177.9 337 33.2
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-42 177.9 337 33.2
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-42 177.2 417 30.9
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.6e-42 176.8 337 33.2
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 1.1e-38 165.2 356 32.9
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.5e-29 133.7 409 26.9
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.5e-29 133.7 409 26.9
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.0e-28 132.1 406 29.3
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.5e-28 129.4 321 29.9
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.7e-26 124.0 455 25.7
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.1e-26 122.9 453 28.3
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 1.8e-25 121.3 184 35.3
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.9e-25 120.2 396 25.3
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 6.7e-25 119.4 412 27.7
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.8e-25 119.0 453 27.8
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.3e-23 115.2 329 28.0
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.8e-23 113.2 330 27.6
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 6.3e-23 112.8 403 26.3
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.3e-22 109.8 329 27.4
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-21 107.8 329 27.1
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.0e-21 107.8 246 29.7
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 3.5e-21 107.1 375 28.8
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 7.7e-21 105.9 234 29.9
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.7e-21 105.9 330 27.9
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-20 105.5 444 28.2
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 1.3e-20 105.1 193 33.7
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-20 104.8 393 24.9
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.5e-20 102.8 451 25.3
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-19 102.1 305 25.9
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-19 102.1 397 24.7
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 7.2e-19 99.4 384 25.0
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.4e-19 99.0 230 28.3
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.1e-18 97.8 266 27.1
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.3e-17 94.4 402 25.1
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.3e-17 94.4 437 25.2
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.8e-17 92.8 251 25.5
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.8e-17 92.8 251 25.5
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.8e-17 92.8 251 25.5
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.8e-17 92.4 384 25.3
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 1.2e-16 92.0 228 31.1
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-16 91.7 405 26.4
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-16 91.3 327 26.9
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.6e-16 90.9 330 24.5
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 5.7e-16 89.7 415 24.8
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.5e-16 89.4 205 30.7
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.5e-16 89.4 351 26.2
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.3e-15 88.6 312 23.7
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-15 88.2 205 30.2
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-15 88.2 420 22.1
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.8e-15 87.4 157 32.5
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.8e-15 87.4 413 23.5
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-15 87.4 352 27.3
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.8e-15 86.7 157 33.1
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.8e-15 86.7 333 24.9
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.1e-14 85.5 164 29.9
vmacro17715 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.1e-14 85.5 193 30.1
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.8e-14 84.7 306 26.1
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.4e-14 83.2 342 24.6
vmacro23365 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 7.0e-14 82.8 212 29.7
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 2.0e-13 81.3 169 35.5
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.5e-13 80.5 167 29.3
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.5e-13 80.5 167 29.3
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-12 78.6 159 32.1
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-12 78.2 386 21.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 1.7e-12 78.2 305 23.6
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 5.0e-12 76.6 141 32.6
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-11 75.5 320 23.4
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 1.1e-11 75.5 345 24.1
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 1.5e-11 75.1 168 30.4
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 1.9e-11 74.7 292 24.7
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.5e-11 74.3 349 22.6
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.5e-11 74.3 339 23.3
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 3.2e-11 73.9 340 24.1
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 3.2e-11 73.9 449 23.4
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.2e-11 73.6 294 25.2
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 7.2e-11 72.8 340 23.8
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 9.4e-11 72.4 314 22.0
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-10 72.0 346 21.7
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.6e-10 71.6 198 29.8
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.7e-10 70.1 372 25.3
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.0e-09 68.9 452 22.3
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 1.8e-09 68.2 220 27.7
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 1.8e-09 68.2 62 43.5
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.3e-09 67.8 100 33.0
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.0e-09 67.0 348 21.6
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 6.8e-09 66.2 135 30.4
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-08 65.1 324 23.5
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-08 65.1 324 23.5
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 1.5e-08 65.1 69 37.7
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.0e-08 64.7 73 38.4
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.5e-08 62.8 415 20.7
CSS0050368 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112446 9.8e-08 62.4 315 24.8
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-07 62.0 182 23.6
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 1.7e-07 61.6 144 29.9
CSS0028748 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110352 2.8e-07 60.8 232 23.7
FAN04G3025 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.8e-07 60.8 163 28.2
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 3.7e-07 60.5 53 41.5
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-07 60.5 206 25.7
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.9e-07 60.1 461 21.3
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 6.3e-07 59.7 364 22.3
FvH4_7g04250 Fragaria vesca HOM05D003258 ORTHO05D010059 1.1e-06 58.9 245 24.5
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.1e-06 58.9 158 27.2
TWI38G2357 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.1e-06 58.9 100 39.0
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-06 58.2 115 31.3
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-06 58.2 115 31.3
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-06 58.2 115 31.3
CSS0044012 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D108943 1.8e-06 58.2 215 23.7
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.4e-06 57.8 115 31.3
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.4e-06 57.8 115 31.3
FvH4_7g04380 Fragaria vesca HOM05D003258 ORTHO05D010059 2.4e-06 57.8 165 26.7
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.1e-06 57.4 127 29.1
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 4.1e-06 57.0 273 26.0
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.4e-06 56.6 82 36.6
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 5.4e-06 56.6 434 22.6
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.0e-06 56.2 134 26.1
FvH4_3g24490 Fragaria vesca HOM05D003258 ORTHO05D010059 9.1e-06 55.8 165 26.1
FvH4_3g33780 Fragaria vesca HOM05D003258 ORTHO05D010059 9.1e-06 55.8 165 26.1


User provided reference genes

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