Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.0e-67 260.0 135 100.0
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 5.4e-37 157.9 119 80.7
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.2e-36 156.8 119 79.0
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.9e-34 149.4 119 77.3
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.3e-34 148.7 119 71.4
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 4.3e-34 148.3 119 73.1
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.8e-33 145.6 119 75.6
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.6e-33 145.2 119 70.6
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.6e-33 145.2 119 70.6
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 3.6e-33 145.2 119 70.6
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 4.7e-33 144.8 119 69.7
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.7e-33 144.8 119 69.7
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.7e-33 144.8 119 69.7
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 4.7e-33 144.8 119 73.9
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 4.7e-33 144.8 119 73.9
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 8.1e-33 144.1 119 73.9
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 8.1e-33 144.1 119 69.7
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.1e-32 143.7 119 73.1
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 1.8e-32 142.9 119 73.1
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 3.1e-32 142.1 122 68.9
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 4.0e-32 141.7 119 69.7
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 4.0e-32 141.7 119 69.7
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 8.9e-32 140.6 128 65.6
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.2e-31 140.2 119 72.3
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.2e-31 140.2 119 68.9
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.5e-31 139.8 119 68.9
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 1.5e-31 139.8 119 70.6
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 2.6e-31 139.0 119 71.4
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 3.4e-31 138.7 119 70.6
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 3.4e-31 138.7 119 68.9
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 3.4e-31 138.7 119 67.2
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 4.4e-31 138.3 119 68.9
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 5.8e-31 137.9 119 68.9
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 5.8e-31 137.9 119 71.4
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 7.6e-31 137.5 119 69.7
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 7.6e-31 137.5 119 67.2
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 9.9e-31 137.1 119 68.9
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 9.9e-31 137.1 119 68.1
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 1.3e-30 136.7 119 68.9
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.3e-30 136.7 119 68.1
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 2.9e-30 135.6 119 67.2
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 2.9e-30 135.6 119 68.1
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 2.9e-30 135.6 119 67.2
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 3.8e-30 135.2 119 67.2
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 3.8e-30 135.2 119 66.4
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 3.8e-30 135.2 119 69.7
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 4.9e-30 134.8 119 71.4
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 4.9e-30 134.8 119 70.6
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 4.9e-30 134.8 119 68.1
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 6.4e-30 134.4 119 65.5
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 8.4e-30 134.0 119 68.9
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 8.4e-30 134.0 119 66.4
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 1.1e-29 133.7 119 67.2
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 1.1e-29 133.7 119 66.4
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 1.4e-29 133.3 119 66.4
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.4e-29 133.3 119 67.2
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.9e-29 132.9 119 66.4
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.9e-29 132.9 119 65.5
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 2.4e-29 132.5 119 68.9
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 2.4e-29 132.5 119 70.6
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 2.4e-29 132.5 119 68.1
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 2.4e-29 132.5 119 68.1
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 4.2e-29 131.7 119 64.7
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 5.4e-29 131.3 119 63.9
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 7.1e-29 131.0 119 64.7
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 9.3e-29 130.6 119 65.5
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 1.6e-28 129.8 119 63.9
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 2.1e-28 129.4 119 66.4
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.5e-28 128.6 119 66.4
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 3.5e-28 128.6 119 63.0
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 3.5e-28 128.6 119 63.9
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 3.5e-28 128.6 119 63.9
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 6.0e-28 127.9 119 64.7
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 6.0e-28 127.9 119 65.5
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 7.8e-28 127.5 119 67.2
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 7.8e-28 127.5 119 62.2
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 7.8e-28 127.5 119 62.2
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 1.7e-27 126.3 119 63.0
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 3.0e-27 125.6 119 63.9
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 6.6e-27 124.4 119 63.9
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.1e-26 123.6 119 62.2
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 1.5e-26 123.2 120 64.2
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 1.5e-26 123.2 119 63.9
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-26 122.9 119 63.0
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 2.5e-26 122.5 119 67.2
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 3.3e-26 122.1 120 63.3
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 3.3e-26 122.1 120 63.3
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 5.6e-26 121.3 119 62.2
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 1.6e-25 119.8 119 63.0
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 2.1e-25 119.4 119 63.0
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 2.8e-25 119.0 105 70.5
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 3.6e-25 118.6 104 66.3
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 8.1e-25 117.5 133 57.9
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 8.1e-25 117.5 133 57.9
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 2.0e-23 112.8 119 63.9
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 2.6e-23 112.5 119 58.8
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 9.9e-23 110.5 133 56.4
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.7e-22 109.8 98 63.3
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 2.9e-22 109.0 111 61.3
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 3.8e-22 108.6 119 58.8
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.4e-21 106.7 135 52.6
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 2.4e-21 105.9 120 58.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 4.2e-21 105.1 120 58.3
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 7.9e-20 100.9 119 55.5
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 3.9e-19 98.6 119 53.8
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 3.9e-19 98.6 119 53.8
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.9e-19 98.6 139 49.6
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.9e-19 98.6 139 49.6
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 7.4e-18 94.4 119 52.1
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 8.1e-17 90.9 119 48.7
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 9.0e-16 87.4 121 52.1
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 3.8e-14 82.0 119 48.7
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 3.8e-14 82.0 119 48.7
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 1.1e-13 80.5 49 83.7
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.4e-13 80.1 82 62.2
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.2e-13 79.0 88 61.4
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.4e-08 62.8 34 94.1
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 3.4e-07 58.9 80 45.0


User provided reference genes

Program Settings