Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044835 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D017532 2.2e-67 258.8 129 100.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 3.5e-41 171.8 121 71.9
CAN.G1823.3 Capsicum annuum HOM05D004966 ORTHO05D017532 7.5e-36 154.1 95 77.9
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 2.0e-28 129.4 80 76.2
CSS0002033 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 4.1e-26 121.7 71 84.5
BcaC09g50643 Brassica carinata HOM05D003801 ORTHO05D017532 1.0e-24 117.1 98 61.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 4.7e-22 108.2 77 63.6
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.0e-21 107.1 82 62.2
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 9.2e-18 94.0 79 62.0
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.9e-17 91.3 65 70.8
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.0e-16 90.5 50 82.0
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.0e-16 90.5 78 52.6
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.5e-15 86.7 55 69.1
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 2.4e-10 69.3 98 41.8
BolC1t01004H Brassica oleracea HOM05D004966 ORTHO05D017532 2.4e-10 69.3 60 58.3
CSS0019148 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 1.6e-09 66.6 37 86.5
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.6e-09 66.6 35 88.6
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.0e-08 61.6 46 54.3
COL.COLO4_27263 Corchorus olitorius HOM05D010859 ORTHO05D010098 1.1e-07 60.5 64 45.3
C01p10430 Brassica napus HOM05D003801 ORTHO05D017532 1.5e-07 60.1 49 53.1
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.6e-07 58.2 31 80.6
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 9.5e-07 57.4 36 72.2


User provided reference genes

Program Settings