Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.1e-275 952.6 464 100.0
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 8.9e-180 634.0 493 66.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-179 633.3 493 66.1
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.4e-171 605.1 456 65.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-167 593.6 455 64.6
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 3.0e-167 592.4 455 64.4
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 6.6e-167 591.3 456 64.3
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.5e-166 587.4 456 64.5
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 6.8e-164 581.3 452 64.2
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 6.4e-162 574.7 466 62.2
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 5.4e-161 571.6 452 62.4
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.2e-157 560.5 438 63.2
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 3.6e-157 558.9 462 61.3
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.0e-155 553.1 457 61.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 5.8e-155 551.6 457 61.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.4e-153 546.2 443 62.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 3.5e-152 542.3 456 61.2
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.3e-151 540.4 464 58.0
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.3e-151 540.4 464 58.0
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.7e-151 540.0 442 61.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.9e-151 538.9 447 60.4
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 7.3e-150 534.6 439 59.2
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 9.6e-150 534.3 473 58.1
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.1e-149 533.1 468 59.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 2.1e-149 533.1 432 61.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 2.8e-149 532.7 437 60.9
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.8e-149 532.7 481 57.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.6e-149 532.3 467 59.3
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 4.7e-149 531.9 439 59.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 6.2e-149 531.6 442 59.3
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 8.1e-149 531.2 486 57.4
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.8e-148 530.0 447 60.0
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 3.1e-148 529.3 431 60.3
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 5.2e-148 528.5 467 57.2
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 8.9e-148 527.7 452 60.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.2e-147 527.3 452 60.0
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.5e-147 526.9 464 60.6
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.7e-146 523.5 473 57.1
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.1e-145 520.8 437 60.2
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.9e-145 520.0 442 57.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.9e-145 520.0 470 57.2
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 1.9e-145 520.0 443 60.3
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 2.4e-145 519.6 482 56.6
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.4e-145 519.6 461 59.2
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 7.1e-145 518.1 413 61.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.6e-144 516.9 425 60.7
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.6e-144 516.9 420 61.9
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.6e-144 515.4 470 56.4
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 5.1e-143 511.9 482 55.0
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.6e-143 511.5 465 57.2
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 8.7e-143 511.1 464 58.6
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-142 510.8 464 58.0
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-142 510.4 419 62.1
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.3e-142 509.2 423 60.5
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.6e-142 507.7 464 58.4
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 2.1e-141 506.5 492 52.8
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.1e-140 504.2 479 56.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.8e-140 503.4 448 56.7
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.2e-139 500.7 460 55.9
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.6e-139 499.6 458 55.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 2.6e-139 499.6 367 67.3
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 1.3e-138 497.3 464 54.7
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.8e-138 495.7 409 60.1
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.7e-136 489.6 380 61.8
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 8.7e-135 484.6 379 62.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 3.3e-134 482.6 468 53.6
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 5.6e-134 481.9 484 53.1
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 5.6e-134 481.9 459 54.5
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.6e-133 479.2 429 55.9
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.4e-132 477.2 430 55.3
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.8e-132 476.9 426 56.3
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.1e-132 476.1 469 54.4
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.1e-132 476.1 438 57.3
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.2e-131 474.2 431 55.0
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 3.4e-131 472.6 467 54.0
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.5e-131 472.2 452 54.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 4.9e-130 468.8 453 57.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.6e-128 462.2 374 60.2
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 6.0e-128 461.8 429 54.5
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.8e-127 460.3 474 51.7
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.9e-127 459.1 412 57.0
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.1e-126 457.6 388 58.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 3.3e-126 456.1 469 50.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 9.6e-126 454.5 389 59.1
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 4.8e-125 452.2 430 54.4
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.8e-124 450.3 429 54.8
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.4e-124 449.9 416 54.6
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.3e-124 448.7 442 54.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.3e-124 448.7 442 54.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.3e-124 448.7 442 54.3
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 9.0e-124 448.0 433 54.0
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.5e-123 447.2 403 57.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.5e-123 447.2 452 53.3
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 4.9e-122 442.2 429 53.1
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 9.3e-121 438.0 470 50.2
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.2e-120 437.6 462 51.5
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.9e-118 430.3 418 51.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.6e-115 419.9 379 56.2
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.7e-107 391.7 476 43.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-91 340.9 461 45.6
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 8.2e-85 318.5 366 47.3
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 7.2e-81 305.4 317 51.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 2.3e-79 300.4 359 45.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.3e-74 284.6 206 62.6
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 7.2e-73 278.9 298 51.0
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.3e-71 273.9 258 55.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 8.0e-64 248.8 394 38.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.2e-62 245.0 462 35.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 8.0e-56 222.2 314 42.0
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.9e-52 211.1 415 35.9
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 4.4e-38 163.3 169 50.9
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 4.3e-33 146.7 112 65.2
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.1e-31 142.1 374 29.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.8e-31 141.4 128 54.7
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.9e-29 133.3 380 30.8
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.4e-28 131.7 139 50.4
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.9e-28 131.3 376 29.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.0e-23 112.5 330 30.0
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.1e-19 101.3 56 76.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.8e-08 64.3 89 42.7


User provided reference genes

Program Settings