Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 7.8e-62 240.4 127 100.0
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.5e-52 208.8 145 82.1
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 3.3e-52 208.4 145 82.1
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.0e-45 186.8 141 75.2
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 8.7e-45 183.7 142 73.2
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 7.3e-44 180.6 141 71.6
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 3.1e-42 175.3 141 70.2
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.0e-41 172.6 142 70.4
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 3.8e-40 168.3 142 65.5
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 2.4e-39 165.6 141 65.2
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 7.1e-39 164.1 141 65.2
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.7e-38 162.2 141 65.2
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 4.6e-38 161.4 141 63.8
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 4.6e-38 161.4 141 63.8
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 7.9e-38 160.6 141 65.2
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 7.9e-38 160.6 141 63.8
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 63.1
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 63.1
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 63.8
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 64.5
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 63.8
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 1.0e-37 160.2 141 63.8
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 2.3e-37 159.1 141 63.8
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 2.3e-37 159.1 141 63.1
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 3.0e-37 158.7 141 64.5
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 8.7e-37 157.1 141 61.0
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 1.9e-36 156.0 141 61.7
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 2.5e-36 155.6 141 63.1
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 2.5e-36 155.6 140 62.1
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 5.6e-36 154.5 141 63.1
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 5.6e-36 154.5 141 58.9
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 5.6e-36 154.5 141 58.9
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 2.1e-35 152.5 141 58.9
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 2.1e-35 152.5 141 59.6
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.7e-35 151.8 141 61.7
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 3.7e-35 151.8 141 59.6
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 3.7e-35 151.8 141 58.9
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 4.8e-35 151.4 143 62.9
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 4.8e-35 151.4 141 59.6
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 4.8e-35 151.4 141 59.6
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 4.8e-35 151.4 141 59.6
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 6.2e-35 151.0 141 60.3
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 8.1e-35 150.6 141 60.3
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 8.1e-35 150.6 141 58.9
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 2.4e-34 149.1 141 61.7
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 2.4e-34 149.1 143 60.1
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 3.1e-34 148.7 141 57.4
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 5.3e-34 147.9 140 58.6
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 6.9e-34 147.5 141 59.6
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 9.0e-34 147.1 141 58.9
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 9.0e-34 147.1 141 58.9
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 1.2e-33 146.7 141 58.9
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 2.6e-33 145.6 141 58.2
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 3.4e-33 145.2 141 60.3
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 4.5e-33 144.8 143 55.9
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 4.5e-33 144.8 141 57.4
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 9.9e-33 143.7 93 83.9
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 1.7e-32 142.9 90 86.7
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 1.7e-32 142.9 143 60.1
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 2.2e-32 142.5 138 61.6
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 2.9e-32 142.1 141 57.4
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 3.8e-32 141.7 141 56.0
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 3.8e-32 141.7 141 57.4
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 3.8e-32 141.7 141 58.2
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 4.9e-32 141.4 141 58.2
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 1.1e-31 140.2 143 58.7
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 1.4e-31 139.8 143 58.0
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 5.5e-31 137.9 140 57.1
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 7.1e-31 137.5 140 57.9
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 7.1e-31 137.5 141 55.3
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 7.1e-31 137.5 129 60.5
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 9.3e-31 137.1 90 78.9
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 1.2e-30 136.7 143 56.6
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 1.2e-30 136.7 140 57.9
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 1.2e-30 136.7 141 55.3
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 1.2e-30 136.7 141 51.8
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 1.6e-30 136.3 143 55.9
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 1.6e-30 136.3 147 52.4
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 2.7e-30 135.6 143 54.5
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 2.7e-30 135.6 142 55.6
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 4.6e-30 134.8 144 53.5
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 4.6e-30 134.8 143 54.5
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 4.6e-30 134.8 142 56.3
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 6.0e-30 134.4 141 56.0
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 6.0e-30 134.4 143 57.3
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 6.0e-30 134.4 142 54.9
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 6.0e-30 134.4 143 55.2
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 7.9e-30 134.0 143 54.5
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 7.9e-30 134.0 142 54.9
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.0e-29 133.7 90 80.0
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 1.3e-29 133.3 90 80.0
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 1.8e-29 132.9 142 57.7
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 2.3e-29 132.5 141 51.8
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 5.1e-29 131.3 138 58.0
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 5.1e-29 131.3 143 53.8
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 6.7e-29 131.0 142 55.6
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 8.7e-29 130.6 141 51.8
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 8.7e-29 130.6 141 54.6
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 1.1e-28 130.2 141 52.5
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.5e-28 129.8 141 52.5
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 1.5e-28 129.8 141 51.8
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 2.5e-28 129.0 141 50.4
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 3.3e-28 128.6 141 50.4
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 3.3e-28 128.6 141 50.4
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 3.3e-28 128.6 141 50.4
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 3.3e-28 128.6 141 52.5
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 5.6e-28 127.9 141 50.4
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 5.6e-28 127.9 141 50.4
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 7.4e-28 127.5 141 50.4
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 7.4e-28 127.5 141 50.4
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 7.4e-28 127.5 141 53.2
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 7.4e-28 127.5 136 55.9
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 9.6e-28 127.1 141 48.9
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 1.6e-27 126.3 143 52.4
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 2.1e-27 125.9 141 50.4
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 2.1e-27 125.9 141 50.4
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 2.8e-27 125.6 141 50.4
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 2.8e-27 125.6 141 49.6
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 4.8e-27 124.8 141 48.9
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-26 123.2 90 76.7
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 2.4e-26 122.5 134 53.7
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 3.1e-26 122.1 141 48.9
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.0e-25 119.4 141 44.7
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 2.6e-25 119.0 144 47.2
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 5.8e-25 117.9 130 56.9
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.2e-24 115.9 141 46.8
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 9.3e-23 110.5 147 47.6
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.2e-22 110.2 147 47.6
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.2e-22 110.2 188 39.4
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 4.6e-22 108.2 141 49.6
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.8e-21 106.3 102 56.9
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 4.3e-20 101.7 113 53.1
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 5.7e-20 101.3 114 54.4
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 3.7e-19 98.6 132 46.2
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 3.7e-19 98.6 113 53.1
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 4.8e-19 98.2 141 46.8
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 6.3e-19 97.8 137 48.2
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 1.4e-18 96.7 145 46.2
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 2.6e-17 92.4 63 76.2
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 1.7e-16 89.7 62 80.6
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.2e-16 89.4 94 51.1
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.2e-16 89.4 94 51.1
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 5.5e-15 84.7 133 40.6
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 8.8e-13 77.4 56 69.6
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 2.5e-12 75.9 140 37.1
Actinidia37807 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.7e-11 73.2 65 64.6
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 2.0e-09 66.2 141 31.2
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 3.4e-09 65.5 40 90.0
AagrBONN_evm.TU.Sc2ySwM_368.3326 Anthoceros agrestis HOM05D003667 ORTHO05D004397 5.9e-09 64.7 90 44.4
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 1.3e-08 63.5 147 32.7
HanXRQChr04g0115761 Helianthus annuus HOM05D003667 ORTHO05D004397 2.9e-08 62.4 70 51.4
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 8.5e-08 60.8 48 68.8
Rhsim02G0196100 Rhododendron simsii HOM05D000056 ORTHO05D000019 8.5e-08 60.8 39 79.5
arahy.Tifrunner.gnm1.ann1.X6I371 Arachis hypogaea HOM05D003667 ORTHO05D004397 9.4e-07 57.4 50 64.0
Rhsim02G0194800 Rhododendron simsii HOM05D003667 ORTHO05D338567 7.9e-06 54.3 33 81.8


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