Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044783 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 5.3e-59 230.7 109 100.0
CSS0030508 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 6.1e-47 190.7 109 82.6
CSS0001048 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 8.0e-31 137.1 113 63.7
CSS0003960 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 4.9e-20 101.3 78 65.4
Actinidia22891 Actinidia chinensis HOM05D001842 ORTHO05D001849 1.6e-10 69.7 168 32.7
CSS0024056 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D110517 6.6e-09 64.3 80 50.0
Rhsim10G0194400 Rhododendron simsii HOM05D001842 ORTHO05D001849 6.6e-09 64.3 171 28.7
CSS0030981 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 3.6e-07 58.5 177 30.5
COL.COLO4_07475 Corchorus olitorius HOM05D001842 ORTHO05D001849 4.7e-07 58.2 90 43.3
ECA234G4380 Erigeron canadensis HOM05D001418 ORTHO05D002038 8.0e-07 57.4 27 85.2
Manes.01G155900 Manihot esculenta HOM05D001842 ORTHO05D001849 2.3e-06 55.8 22 100.0
Sabra05G0196200 Salix brachista HOM05D001842 ORTHO05D001849 2.3e-06 55.8 132 34.1
TWI09G0475 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 2.3e-06 55.8 22 100.0
CSS0043241 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D001849 4.0e-06 55.1 24 87.5
vmacro20625 Vaccinium macrocarpon HOM05D001842 ORTHO05D001849 4.0e-06 55.1 22 95.5
CSS0039865 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D024698 5.2e-06 54.7 23 91.3
Actinidia17353 Actinidia chinensis HOM05D001842 ORTHO05D001849 6.8e-06 54.3 22 95.5
CSS0024804 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
Haze_02003 Corylus avellana HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
MBI05_g33293_MAGBIO Magnolia biondii HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
MD05G1135500 Malus domestica HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
PSO541G1162 Papaver somniferum HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
PSO675G7298 Papaver somniferum HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
Prupe.8G179600 Prunus persica HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
QL11p056280 Quercus lobata HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
Sed0008264 Sechium edule HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
Sed0023090 Sechium edule HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5
Sc05g0006840 Simmondsia chinensis HOM05D001842 ORTHO05D001849 8.9e-06 53.9 22 95.5


User provided reference genes

Program Settings