Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044782 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D024730 6.9e-40 166.8 80 100.0
CSS0024055 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D024730 2.4e-32 141.7 81 91.4
CSS0033108 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D001875 9.7e-10 66.6 33 84.8
Actinidia31507 Actinidia chinensis HOM05D001766 ORTHO05D001875 3.7e-09 64.7 33 78.8
Dinv21672 Davidia involucrata HOM05D001766 ORTHO05D001875 3.7e-09 64.7 33 78.8
Sopen08g026760 Solanum pennellii HOM05D001766 ORTHO05D001875 6.3e-09 63.9 33 78.8
vmacro14136 Vaccinium macrocarpon HOM05D001766 ORTHO05D001875 1.4e-08 62.8 36 72.2
Solyc08g078250.4 Solanum lycopersicum HOM05D001766 ORTHO05D001875 5.3e-08 60.8 33 72.7
Nitab4.5_0009564g0030 Nicotiana tabacum HOM05D001766 ORTHO05D001875 7.0e-08 60.5 33 72.7
PGSC0003DMG400026236 Solanum tuberosum HOM05D001766 ORTHO05D001875 7.0e-08 60.5 33 72.7
Actinidia02165 Actinidia chinensis HOM05D001766 ORTHO05D001875 9.1e-08 60.1 33 72.7
CAN.G1312.13 Capsicum annuum HOM05D001766 ORTHO05D001875 9.1e-08 60.1 33 69.7
Nitab4.5_0002601g0060 Nicotiana tabacum HOM05D001766 ORTHO05D001875 9.1e-08 60.1 33 72.7
Actinidia10846 Actinidia chinensis HOM05D001766 ORTHO05D001875 1.2e-07 59.7 33 75.8
Actinidia14395 Actinidia chinensis HOM05D001766 ORTHO05D001875 1.6e-07 59.3 33 72.7
Oeu006827.1 Olea europaea HOM05D001766 ORTHO05D001875 1.6e-07 59.3 33 69.7
Peaxi162Scf00346g00416 Petunia axillaris HOM05D001766 ORTHO05D001875 1.6e-07 59.3 33 69.7
Rhsim07G0115500 Rhododendron simsii HOM05D001766 ORTHO05D001875 7.7e-07 57.0 36 63.9
TAR374G1385 Trochodendron aralioides HOM05D001766 ORTHO05D001875 1.0e-06 56.6 38 65.8
Aa31LG10G14460 Aethionema arabicum HOM05D001766 ORTHO05D001875 1.3e-06 56.2 44 54.5
CSS0044715 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D001875 1.3e-06 56.2 33 66.7
CiPaw.11G083100 Carya illinoinensis HOM05D001766 ORTHO05D001875 2.2e-06 55.5 50 54.0
SGA_v2.0_scaffold104G30199 Striga asiatica HOM05D001766 ORTHO05D001875 2.2e-06 55.5 45 53.3
Cc08_g11970 Coffea canephora HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 63.6
Gohir.A12G096600 Gossypium hirsutum HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 63.6
Gohir.D12G099400 Gossypium hirsutum HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 63.6
Gorai.008G108300 Gossypium raimondii HOM05D001766 ORTHO05D001875 3.8e-06 54.7 33 63.6
Glyma.01G207200 Glycine max HOM05D001766 ORTHO05D001875 5.0e-06 54.3 33 66.7
Hma1.2p1_1335F.1_g276390 Hydrangea macrophylla HOM05D001766 ORTHO05D001875 5.0e-06 54.3 33 60.6
Dinv39180 Davidia involucrata HOM05D001766 ORTHO05D001875 6.5e-06 53.9 33 63.6
Migut.A01154 Erythranthe guttata HOM05D001766 ORTHO05D001875 6.5e-06 53.9 33 57.6
Glyma.11G036032 Glycine max HOM05D001766 ORTHO05D024730 6.5e-06 53.9 32 68.8
SalBow6G4780 Salvia bowleyana HOM05D001766 ORTHO05D001875 6.5e-06 53.9 33 63.6
Lj2g0012296 Lotus japonicus HOM05D001766 ORTHO05D001875 8.5e-06 53.5 47 53.2
QL12p010900 Quercus lobata HOM05D001766 ORTHO05D001875 8.5e-06 53.5 33 66.7


User provided reference genes

Program Settings