Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044781 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 1.9e-98 362.5 178 100.0
CSS0002594 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 8.9e-96 353.6 174 99.4
Dinv08583 Davidia involucrata HOM05D001917 ORTHO05D010068 1.1e-58 230.3 185 63.2
Actinidia34061 Actinidia chinensis HOM05D001917 ORTHO05D010068 5.6e-58 228.0 185 63.2
Hma1.2p1_0926F.1_g237550 Hydrangea macrophylla HOM05D001917 ORTHO05D010068 2.8e-57 225.7 183 63.9
Rhsim03G0096000 Rhododendron simsii HOM05D001917 ORTHO05D010068 4.5e-55 218.4 186 62.4
Nitab4.5_0001781g0130 Nicotiana tabacum HOM05D001917 ORTHO05D010068 5.1e-51 204.9 185 56.8
GSVIVG01034617001 Vitis vinifera HOM05D001917 ORTHO05D010068 3.3e-50 202.2 186 57.0
Nitab4.5_0009933g0010 Nicotiana tabacum HOM05D001917 ORTHO05D010068 4.3e-50 201.8 187 57.8
vmacro07272 Vaccinium macrocarpon HOM05D001917 ORTHO05D010068 1.6e-49 199.9 183 59.6
Oeu033274.1 Olea europaea HOM05D001917 ORTHO05D010068 2.8e-49 199.1 187 57.8
PGSC0003DMG400001999 Solanum tuberosum HOM05D001917 ORTHO05D010068 2.8e-49 199.1 185 55.7
Sopen11g002380 Solanum pennellii HOM05D001917 ORTHO05D010068 4.8e-49 198.4 185 55.1
Solyc11g006490.2 Solanum lycopersicum HOM05D001917 ORTHO05D010068 6.2e-49 198.0 185 55.1
Sabra10G0189800 Salix brachista HOM05D001917 ORTHO05D010068 1.4e-48 196.8 176 59.7
Potri.008G018400 Populus trichocarpa HOM05D001917 ORTHO05D010068 2.4e-48 196.1 175 58.9
Potri.010G242800 Populus trichocarpa HOM05D001917 ORTHO05D010068 2.4e-48 196.1 175 59.4
Peaxi162Scf00120g01525 Petunia axillaris HOM05D001917 ORTHO05D010068 7.6e-47 191.0 187 55.1
QL04p047945 Quercus lobata HOM05D001917 ORTHO05D010068 7.6e-47 191.0 186 56.5
CAN.G143.42 Capsicum annuum HOM05D001917 ORTHO05D010068 1.3e-46 190.3 185 53.0
Oeu009250.1 Olea europaea HOM05D001917 ORTHO05D010068 3.8e-46 188.7 187 55.6
Atru.chr12.1073 Acer truncatum HOM05D001917 ORTHO05D010068 4.2e-45 185.3 184 56.0
Ciclev10016047m.g Citrus clementina HOM05D001917 ORTHO05D010068 5.5e-45 184.9 185 55.7
CiPaw.13G043900 Carya illinoinensis HOM05D001917 ORTHO05D010068 1.2e-44 183.7 185 54.6
Sabra08G0012000 Salix brachista HOM05D001917 ORTHO05D010068 2.7e-44 182.6 171 57.9
TAR636G1510 Trochodendron aralioides HOM05D001917 ORTHO05D010068 6.0e-44 181.4 187 54.5
Cfa010522 Carpinus fangiana HOM05D001917 ORTHO05D010068 1.8e-43 179.9 174 56.9
Eucgr.J00290 Eucalyptus grandis HOM05D001917 ORTHO05D010068 2.3e-43 179.5 187 52.4
Lj2A35T44 Lonicera japonica HOM05D001917 ORTHO05D010068 1.5e-42 176.8 177 55.4
Cc02_g09360 Coffea canephora HOM05D001917 ORTHO05D010068 4.3e-42 175.3 183 53.0
Haze_03462 Corylus avellana HOM05D001917 ORTHO05D010068 3.1e-40 169.1 172 54.7
PGR044G0163 Punica granatum HOM05D001917 ORTHO05D010068 1.3e-38 163.7 192 50.5
MSTRG.9031 Avicennia marina HOM05D001917 ORTHO05D010068 7.9e-36 154.5 187 47.6
Rhsim03G0095000 Rhododendron simsii HOM05D001917 ORTHO05D010068 7.9e-36 154.5 148 58.8
Cpa.g.sc33.133 Carica papaya HOM05D001917 ORTHO05D010068 9.7e-34 147.5 189 45.5
Hund22265 Selenicereus undatus HOM05D001917 ORTHO05D010068 4.8e-33 145.2 159 45.9
Prupe.2G072200 Prunus persica HOM05D001917 ORTHO05D010068 1.1e-32 144.1 184 46.2
Migut.F00844 Erythranthe guttata HOM05D001917 ORTHO05D010068 1.4e-32 143.7 186 44.6
AUR62034488 Chenopodium quinoa HOM05D001917 ORTHO05D010068 5.9e-31 138.3 185 43.8
Ah.04g162550 Amaranthus hybridus HOM05D001917 ORTHO05D010068 1.3e-30 137.1 185 43.2
AUR62034166 Chenopodium quinoa HOM05D001917 ORTHO05D010068 4.2e-29 132.1 185 42.7
ECA238G0804 Erigeron canadensis HOM05D001917 ORTHO05D010068 4.6e-28 128.6 216 38.4
CANSAT56G3891 Cannabis sativa HOM05D001917 ORTHO05D010068 3.9e-27 125.6 173 46.2
Lsat_1_v5_gn_2_105921 Lactuca sativa HOM05D001917 ORTHO05D010068 1.5e-26 123.6 141 51.1
Hund06808 Selenicereus undatus HOM05D001917 ORTHO05D010068 5.7e-26 121.7 187 41.2
Sc09g0005080 Simmondsia chinensis HOM05D001917 ORTHO05D010068 5.7e-26 121.7 149 46.3
Sed0005533 Sechium edule HOM05D001917 ORTHO05D010068 2.4e-24 116.3 184 39.7
HPP92_013376 Vanilla planifolia HOM05D001917 ORTHO05D010068 5.3e-24 115.2 159 43.4
Nn6g34689 Nelumbo nucifera HOM05D001917 ORTHO05D010068 6.9e-24 114.8 174 40.2
ClCG05G021960 Citrullus lanatus HOM05D001917 ORTHO05D010068 2.0e-23 113.2 187 40.6
CsaV3_5G035190 Cucumis sativus L. HOM05D001917 ORTHO05D010068 5.9e-23 111.7 182 41.8
MELO3C012332.2 Cucumis melo HOM05D001917 ORTHO05D010068 7.7e-23 111.3 185 41.1
AT5G04840 Arabidopsis thaliana HOM05D001917 ORTHO05D010068 2.9e-22 109.4 173 42.2
Aa31LG11G5870 Aethionema arabicum HOM05D001917 ORTHO05D010068 5.0e-22 108.6 187 40.6
HanXRQChr02g0053591 Helianthus annuus HOM05D001917 ORTHO05D010068 5.0e-22 108.6 136 45.6
A10p31370 Brassica napus HOM05D001917 ORTHO05D010068 4.2e-21 105.5 192 39.1
BraA10t45183Z Brassica rapa HOM05D001917 ORTHO05D010068 9.4e-21 104.4 192 38.5
SalBow3G3254 Salvia bowleyana HOM05D001917 ORTHO05D010068 9.4e-21 104.4 184 40.2
Sp6g37990 Schrenkiella parvula HOM05D001917 ORTHO05D010068 9.4e-21 104.4 159 42.8
Carub.0006s0372 Capsella rubella HOM05D001917 ORTHO05D010068 3.6e-20 102.4 157 41.4
AL6G14500 Arabidopsis lyrata HOM05D001917 ORTHO05D010068 6.1e-20 101.7 150 44.0
Thhalv10014187m.g Eutrema salsugineum HOM05D001917 ORTHO05D010068 1.0e-19 100.9 177 39.0
THA.LOC104816474 Tarenaya hassleriana HOM05D001917 ORTHO05D010068 2.3e-19 99.8 184 38.0
CARHR208440 Cardamine hirsuta HOM05D001917 ORTHO05D010068 3.0e-19 99.4 165 41.2
BolC9t59949H Brassica oleracea HOM05D001917 ORTHO05D010068 3.9e-19 99.0 193 36.8
Dinv08577 Davidia involucrata HOM05D001917 ORTHO05D010068 5.1e-19 98.6 174 36.2
C09p72040 Brassica napus HOM05D001917 ORTHO05D010068 1.5e-18 97.1 192 36.5
Zm00001eb243050 Zea mays HOM05D001917 ORTHO05D010068 2.6e-18 96.3 162 37.7
Zm00001eb181550 Zea mays HOM05D001917 ORTHO05D010068 1.7e-17 93.6 152 37.5
Os02g0538900 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D010068 8.2e-17 91.3 193 32.1
ATR0772G184 Amborella trichopoda HOM05D001917 ORTHO05D010068 7.7e-15 84.7 187 30.5
CDE08G1625 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 7.7e-15 84.7 173 35.8
BcaC06g32191 Brassica carinata HOM05D001917 ORTHO05D010068 1.7e-14 83.6 141 40.4
CDE06G0681 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 5.5e-13 78.6 170 36.5
HPP92_004486 Vanilla planifolia HOM05D001917 ORTHO05D002790 3.1e-08 62.8 120 34.2
HPP92_004469 Vanilla planifolia HOM05D001917 ORTHO05D002790 7.0e-08 61.6 93 38.7
Eucgr.I02749 Eucalyptus grandis HOM05D001917 ORTHO05D002790 5.9e-07 58.5 87 36.8
SEGI_34147 Sequoiadendron giganteum HOM05D001917 ORTHO05D002790 7.7e-07 58.2 98 34.7
Os12g0194600 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D002790 1.0e-06 57.8 91 39.6
Zm00001eb169130 Zea mays HOM05D001917 ORTHO05D002790 1.0e-06 57.8 90 40.0
Thecc.10G117300 Theobroma cacao HOM05D001917 ORTHO05D010068 1.7e-06 57.0 108 43.5
Carub.0002s0651 Capsella rubella HOM05D001917 ORTHO05D002790 2.2e-06 56.6 157 29.9
Lsat_1_v5_gn_9_120880 Lactuca sativa HOM05D001917 ORTHO05D002790 2.2e-06 56.6 203 28.1
PGR142G3237 Punica granatum HOM05D001917 ORTHO05D002790 2.2e-06 56.6 88 37.5
VMungo0251G2048 Vigna mungo HOM05D001917 ORTHO05D002790 2.2e-06 56.6 89 39.3
CARHR053940 Cardamine hirsuta HOM05D001917 ORTHO05D002790 2.9e-06 56.2 151 29.8
HPP92_024409 Vanilla planifolia HOM05D001917 ORTHO05D002790 2.9e-06 56.2 103 34.0
COL.COLO4_11754 Corchorus olitorius HOM05D001917 ORTHO05D002790 5.0e-06 55.5 103 34.0
THA.LOC104807120 Tarenaya hassleriana HOM05D001917 ORTHO05D002790 5.0e-06 55.5 133 30.8
vmacro19875 Vaccinium macrocarpon HOM05D001917 ORTHO05D002790 5.0e-06 55.5 84 38.1
Cpa.g.sc38.34 Carica papaya HOM05D001917 ORTHO05D002790 6.5e-06 55.1 75 38.7
Duzib052G0052 Durio zibethinus HOM05D001917 ORTHO05D002790 6.5e-06 55.1 87 36.8
MBI04_g14398_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 6.5e-06 55.1 87 39.1
MBI11_g44962_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 6.5e-06 55.1 107 34.6
A01p28180 Brassica napus HOM05D001917 ORTHO05D002790 8.5e-06 54.7 101 35.6
BraA01t02948Z Brassica rapa HOM05D001917 ORTHO05D002790 8.5e-06 54.7 101 35.6
CsaV3_5G029950 Cucumis sativus L. HOM05D001917 ORTHO05D002790 8.5e-06 54.7 87 40.2
Nitab4.5_0000548g0190 Nicotiana tabacum HOM05D001917 ORTHO05D002790 8.5e-06 54.7 101 33.7
Nitab4.5_0009812g0050 Nicotiana tabacum HOM05D001917 ORTHO05D002790 8.5e-06 54.7 101 33.7
PGR042G1770 Punica granatum HOM05D001917 ORTHO05D002790 8.5e-06 54.7 87 35.6


User provided reference genes

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