Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 2.7e-133 478.8 266 100.0
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.4e-31 141.0 95 69.5
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.4e-28 130.2 259 35.9
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.4e-28 130.2 96 65.6
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 5.3e-28 129.0 96 65.6
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 3.4e-27 126.3 99 60.6
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.7e-26 124.0 88 68.2
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 8.2e-21 105.1 87 56.3
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 7.7e-19 98.6 92 51.1
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.0e-18 98.2 87 54.0
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 3.8e-18 96.3 90 51.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 5.0e-18 95.9 91 51.6
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 5.0e-18 95.9 89 56.2
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 5.0e-18 95.9 92 51.1
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 8.5e-18 95.1 92 48.9
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 1.4e-17 94.4 94 50.0
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.4e-17 94.4 88 51.1
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.4e-17 94.4 78 52.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 3.2e-17 93.2 87 50.6
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.2e-17 93.2 92 48.9
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 3.2e-17 93.2 80 52.5
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 4.2e-17 92.8 81 53.1
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 5.5e-17 92.4 88 51.1
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 5.5e-17 92.4 94 50.0
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 9.4e-17 91.7 71 56.3
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 9.4e-17 91.7 80 51.2
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 2.1e-16 90.5 88 48.9
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 2.7e-16 90.1 80 50.0
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.4e-15 87.8 88 47.7
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.4e-15 87.8 143 37.1
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 2.3e-15 87.0 99 46.5
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.3e-15 87.0 90 47.8
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 2.3e-15 87.0 90 48.9
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 3.9e-15 86.3 92 44.6
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 3.9e-15 86.3 90 46.7
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 5.2e-15 85.9 87 44.8
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 6.7e-15 85.5 101 42.6
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 6.7e-15 85.5 126 42.1
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 8.8e-15 85.1 95 46.3
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.5e-14 84.3 87 44.8
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 9.7e-14 81.6 85 51.8
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 9.7e-14 81.6 78 50.0
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 9.7e-14 81.6 78 50.0
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.3e-13 81.3 93 48.4
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 1.3e-13 81.3 88 48.9
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.2e-13 80.5 87 43.7
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 2.2e-13 80.5 88 47.7
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.7e-13 79.7 88 45.5
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 6.3e-13 79.0 87 48.3
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 6.3e-13 79.0 97 41.2
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-12 78.2 78 48.7
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.1e-12 78.2 97 40.2
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.4e-12 77.8 87 43.7
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.4e-12 77.0 114 39.5
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.4e-12 77.0 88 44.3
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 3.1e-12 76.6 91 45.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 9.1e-12 75.1 111 42.3
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 9.1e-12 75.1 84 45.2
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 1.2e-11 74.7 72 51.4
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 1.6e-11 74.3 90 43.3
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.0e-11 73.9 78 46.2
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.0e-11 73.9 73 47.9
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 5.9e-11 72.4 85 47.1
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 5.9e-11 72.4 54 57.4
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 5.9e-11 72.4 155 33.5
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 7.7e-11 72.0 83 44.6
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.0e-10 71.6 95 38.9
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.0e-10 71.6 73 46.6
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.0e-10 71.6 108 40.7
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.7e-10 70.9 75 46.7
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 2.2e-10 70.5 90 43.3
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 2.9e-10 70.1 72 50.0
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 2.9e-10 70.1 72 43.1
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.8e-10 69.7 88 45.5
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 3.8e-10 69.7 87 46.0
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 5.0e-10 69.3 87 40.2
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 6.5e-10 68.9 93 37.6
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 6.5e-10 68.9 153 32.7
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 8.5e-10 68.6 90 42.2
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 8.0e-08 62.0 99 36.4
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 1.4e-07 61.2 72 38.9
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 1.4e-07 61.2 52 50.0
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.8e-07 60.8 59 45.8
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 2.3e-07 60.5 83 38.6
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 1.2e-06 58.2 86 44.2
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 1.5e-06 57.8 128 32.0


User provided reference genes

Program Settings