Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 3.5e-119 431.8 245 100.0
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 5.9e-42 175.3 243 46.9
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 4.9e-36 155.6 230 54.3
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 2.4e-35 153.3 265 49.8
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 4.7e-31 139.0 234 40.6
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 1.8e-30 137.1 244 49.2
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 2.3e-30 136.7 255 38.0
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 4.0e-30 136.0 250 42.4
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 2.6e-29 133.3 249 44.6
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 4.4e-29 132.5 248 39.5
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 2.2e-28 130.2 263 39.5
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 2.9e-28 129.8 253 47.0
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 4.9e-28 129.0 253 41.9
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 1.1e-27 127.9 233 44.2
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.1e-27 127.9 249 46.2
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 2.4e-27 126.7 258 39.1
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 3.2e-27 126.3 239 43.9
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 5.4e-27 125.6 250 46.8
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 1.2e-26 124.4 253 44.7
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.6e-26 124.0 255 34.1
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.6e-26 124.0 255 34.1
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 2.7e-26 123.2 257 43.6
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 3.5e-26 122.9 263 35.7
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 3.5e-26 122.9 252 37.7
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 6.0e-26 122.1 260 38.1
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 6.0e-26 122.1 255 33.7
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 7.8e-26 121.7 249 34.9
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 7.8e-26 121.7 249 34.9
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 3.0e-25 119.8 165 49.7
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 6.6e-25 118.6 252 38.9
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 8.6e-25 118.2 255 34.5
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 1.1e-24 117.9 265 35.8
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 2.5e-24 116.7 236 45.3
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 2.5e-24 116.7 240 39.6
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 7.3e-24 115.2 227 40.1
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 7.3e-24 115.2 243 39.9
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.2e-23 114.4 236 38.1
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 1.2e-23 114.4 224 39.3
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.6e-23 114.0 259 40.2
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 2.1e-23 113.6 237 39.7
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 2.8e-23 113.2 263 45.2
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 2.8e-23 113.2 249 39.0
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.6e-23 112.8 255 39.6
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 6.2e-23 112.1 249 39.8
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 6.2e-23 112.1 258 43.0
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 6.2e-23 112.1 244 41.0
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 8.1e-23 111.7 255 39.2
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 8.9e-22 108.2 252 36.1
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.2e-21 107.8 241 40.7
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 1.5e-21 107.5 273 35.2
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 1.5e-21 107.5 262 35.5
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.5e-21 107.5 233 45.1
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 5.8e-21 105.5 238 43.7
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 5.8e-21 105.5 233 43.3
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 9.9e-21 104.8 261 33.0
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 9.9e-21 104.8 252 34.5
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 9.9e-21 104.8 252 34.5
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.7e-20 104.0 233 44.6
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 1.1e-19 101.3 256 35.9
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.6e-18 97.4 249 33.3
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 2.7e-18 96.7 169 40.8
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 3.5e-18 96.3 241 32.4
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 3.5e-18 96.3 261 33.7
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 6.0e-18 95.5 260 32.7
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 6.0e-18 95.5 265 31.7
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 1.0e-17 94.7 245 33.1
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.0e-17 94.7 246 39.0
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 1.3e-17 94.4 270 31.9
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.7e-17 94.0 189 39.2
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 2.3e-17 93.6 214 40.7
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 2.3e-17 93.6 255 33.7
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 3.0e-17 93.2 244 32.4
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 5.6e-16 89.0 248 31.9
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 1.6e-15 87.4 236 35.6
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 1.4e-14 84.3 240 37.5
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.4e-14 84.3 231 33.8
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 2.4e-14 83.6 222 35.1
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.0e-14 82.8 230 31.3
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 6.9e-14 82.0 247 36.4
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.3e-12 77.8 248 31.5
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 2.9e-12 76.6 253 36.0
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 3.8e-12 76.3 221 36.2
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 3.8e-12 76.3 209 33.0
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 8.4e-12 75.1 266 32.3
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 1.4e-11 74.3 234 33.3
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 1.9e-11 73.9 268 32.1
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 2.7e-10 70.1 262 30.9
Peaxi162Scf00767g00113 Petunia axillaris HOM05D007199 ORTHO05D007257 3.5e-10 69.7 219 32.0
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 4.6e-10 69.3 246 29.7
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 1.0e-09 68.2 250 29.6
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 1.0e-09 68.2 260 29.6
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 1.3e-09 67.8 255 33.3
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 1.7e-09 67.4 245 29.8
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 1.7e-09 67.4 83 51.8
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 2.3e-09 67.0 250 28.4
HanXRQChr16g0524641 Helianthus annuus HOM05D007199 ORTHO05D007257 2.3e-09 67.0 237 33.8
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 3.0e-09 66.6 264 30.7
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 5.1e-09 65.9 233 31.3
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 1.9e-08 63.9 235 30.6
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 4.3e-08 62.8 248 30.6
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 2.8e-07 60.1 70 52.9
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 2.8e-07 60.1 237 29.5
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 3.6e-07 59.7 247 28.3
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 3.6e-07 59.7 245 31.0
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 4.8e-07 59.3 160 33.8
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 8.1e-07 58.5 74 44.6
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.8e-06 57.4 225 29.3
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 2.4e-06 57.0 241 30.3
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 3.1e-06 56.6 238 30.3
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 4.0e-06 56.2 238 29.4


User provided reference genes

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