Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044659 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 3.2e-39 164.9 96 100.0
CSS0036968 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 6.0e-30 134.0 98 77.6
CSS0022375 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D109211 8.6e-29 130.2 108 75.0
CSS0025856 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D110646 3.6e-27 124.8 107 72.9
CSS0005835 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 1.9e-20 102.4 93 64.5
CSS0028682 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D109265 1.1e-18 96.7 88 64.8
CSS0003257 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 3.3e-12 75.1 88 60.2
vmacro20816 Vaccinium macrocarpon HOM05D000291 ORTHO05D000879 9.6e-12 73.6 67 61.2
Dinv25439 Davidia involucrata HOM05D000291 ORTHO05D000879 1.6e-11 72.8 67 62.7
Actinidia01277 Actinidia chinensis HOM05D000291 ORTHO05D000879 1.8e-10 69.3 69 63.8
Cfa013450 Carpinus fangiana HOM05D000291 ORTHO05D000879 1.5e-09 66.2 75 54.7
Hma1.2p1_1326F.1_g275810 Hydrangea macrophylla HOM05D000291 ORTHO05D000879 2.0e-09 65.9 68 58.8
Sabra06G0056500 Salix brachista HOM05D000291 ORTHO05D000879 2.0e-09 65.9 67 61.2
Sabra18G0116600 Salix brachista HOM05D000291 ORTHO05D000879 2.0e-09 65.9 65 61.5
Medtr2g037980 Medicago truncatula HOM05D000291 ORTHO05D000879 2.6e-09 65.5 41 82.9
Potri.006G075800 Populus trichocarpa HOM05D000291 ORTHO05D000879 3.4e-09 65.1 66 59.1
CSS0039170 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 4.4e-09 64.7 57 77.2
ClCG11G011780 Citrullus lanatus HOM05D000291 ORTHO05D000879 4.4e-09 64.7 70 58.6
Potri.018G142800 Populus trichocarpa HOM05D000291 ORTHO05D000879 4.4e-09 64.7 63 61.9
Ca_02104_v3 Cicer arietinum L. HOM05D000291 ORTHO05D000879 7.6e-09 63.9 40 82.5
Phvul.003G141500 Phaseolus vulgaris HOM05D000291 ORTHO05D000879 2.2e-08 62.4 41 78.0
VMungo1215G0077 Vigna mungo HOM05D000291 ORTHO05D000879 2.2e-08 62.4 43 81.4
GSVIVG01010864001 Vitis vinifera HOM05D000291 ORTHO05D000879 2.9e-08 62.0 67 55.2
MSTRG.19374 Avicennia marina HOM05D000291 ORTHO05D000879 3.8e-08 61.6 67 55.2
CsaV3_2G008710 Cucumis sativus L. HOM05D000291 ORTHO05D000879 6.4e-08 60.8 70 54.3
Nitab4.5_0000007g0370 Nicotiana tabacum HOM05D000291 ORTHO05D000879 8.4e-08 60.5 70 51.4
COL.COLO4_07058 Corchorus olitorius HOM05D000291 ORTHO05D000879 1.4e-07 59.7 67 55.2
CSS0022651 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 1.9e-07 59.3 38 76.3
Duzib150G0075 Durio zibethinus HOM05D000291 ORTHO05D000879 2.4e-07 58.9 68 51.5
MELO3C003976.2 Cucumis melo HOM05D000291 ORTHO05D000879 3.2e-07 58.5 67 59.7
Glyma.13G100400 Glycine max HOM05D000291 ORTHO05D000879 3.2e-07 58.5 68 50.0
Gohir.A05G002400 Gossypium hirsutum HOM05D000291 ORTHO05D000879 3.2e-07 58.5 78 47.4
Duzib168G0006 Durio zibethinus HOM05D000291 ORTHO05D000879 4.2e-07 58.2 73 54.8
Psat1g145640 Pisum sativum HOM05D000291 ORTHO05D000879 4.2e-07 58.2 38 76.3
Psat4g013400 Pisum sativum HOM05D000291 ORTHO05D000879 5.4e-07 57.8 41 70.7
TPR.G5434 Trifolium pratense HOM05D000291 ORTHO05D000879 5.4e-07 57.8 84 47.6
CiPaw.07G196800 Carya illinoinensis HOM05D000291 ORTHO05D000879 7.1e-07 57.4 68 52.9
Ca_21253_v3 Cicer arietinum L. HOM05D000291 ORTHO05D000879 7.1e-07 57.4 42 73.8
Glyma.17G059500 Glycine max HOM05D000291 ORTHO05D000879 7.1e-07 57.4 41 78.0
Lalb_Chr13g0300021 Lupinus albus HOM05D000291 ORTHO05D000879 9.3e-07 57.0 43 74.4
Cpa.g.sc95.13 Carica papaya HOM05D000291 ORTHO05D000879 1.2e-06 56.6 57 64.9
Lj4g0023693 Lotus japonicus HOM05D000291 ORTHO05D000879 1.2e-06 56.6 43 76.7
Haze_22017 Corylus avellana HOM05D000291 ORTHO05D000879 1.6e-06 56.2 79 48.1
Dinv41173 Davidia involucrata HOM05D000291 ORTHO05D000879 1.6e-06 56.2 68 51.5
CAN.G67.5 Capsicum annuum HOM05D000291 ORTHO05D000879 2.1e-06 55.8 69 44.9
Cc00_g20360 Coffea canephora HOM05D000291 ORTHO05D000879 2.1e-06 55.8 54 59.3
Oeu055539.1 Olea europaea HOM05D000291 ORTHO05D000879 2.1e-06 55.8 40 70.0
Thecc.09G185800 Theobroma cacao HOM05D000291 ORTHO05D000879 2.1e-06 55.8 68 51.5
Atru.chr7.758 Acer truncatum HOM05D000291 ORTHO05D000879 2.7e-06 55.5 68 54.4
Atru.chr7.780 Acer truncatum HOM05D000291 ORTHO05D000879 2.7e-06 55.5 68 54.4
Glyma.15G165800 Glycine max HOM05D000291 ORTHO05D000879 3.5e-06 55.1 37 78.4
Medtr4g127440 Medicago truncatula HOM05D000291 ORTHO05D000879 3.5e-06 55.1 41 68.3
Peaxi162Scf00006g02414 Petunia axillaris HOM05D000291 ORTHO05D000879 3.5e-06 55.1 70 44.3
Solyc12g017430.3 Solanum lycopersicum HOM05D000291 ORTHO05D000879 3.5e-06 55.1 67 49.3
Gorai.009G002600 Gossypium raimondii HOM05D000291 ORTHO05D000879 4.6e-06 54.7 55 56.4
MD16G1249100 Malus domestica HOM05D000291 ORTHO05D000879 4.6e-06 54.7 38 78.9
Glyma.09G059500 Glycine max HOM05D000291 ORTHO05D000879 6.0e-06 54.3 41 70.7
Nitab4.5_0001995g0060 Nicotiana tabacum HOM05D000291 ORTHO05D000879 7.8e-06 53.9 41 61.0


User provided reference genes

Program Settings