Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.3e-214 747.7 362 100.0
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.2e-200 703.0 345 98.8
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 6.1e-160 567.8 344 77.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 2.3e-159 565.8 344 77.9
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 8.8e-159 563.9 345 77.1
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.4e-156 556.6 345 76.8
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 5.3e-156 554.7 347 75.5
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 4.5e-155 551.6 345 75.4
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 8.5e-154 547.4 346 76.3
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.1e-153 547.0 344 75.9
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 1.9e-153 546.2 337 75.7
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 5.5e-153 544.7 339 74.9
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 3.6e-152 542.0 345 75.4
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 4.7e-152 541.6 344 75.6
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 8.0e-152 540.8 344 73.5
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.8e-151 539.7 348 76.1
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.3e-151 539.3 345 75.7
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.3e-151 539.3 345 73.6
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.2e-151 538.1 345 73.3
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 6.7e-151 537.7 343 74.3
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-150 537.0 345 73.3
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 4.4e-150 535.0 344 74.4
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 7.5e-150 534.3 344 74.4
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.3e-149 533.5 344 75.3
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 1.7e-149 533.1 344 75.6
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 3.7e-149 531.9 344 74.4
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 4.8e-149 531.6 346 74.9
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 4.8e-149 531.6 346 74.6
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 4.8e-149 531.6 344 74.7
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 6.3e-149 531.2 344 74.1
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 1.1e-148 530.4 339 73.5
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.4e-148 530.0 347 74.1
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.8e-148 529.6 344 73.0
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.1e-148 528.9 344 73.3
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 5.3e-148 528.1 348 72.7
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 9.1e-148 527.3 345 73.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 9.1e-148 527.3 339 73.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.2e-147 526.9 344 73.8
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 2.0e-147 526.2 345 73.0
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 2.0e-147 526.2 340 74.1
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 2.0e-147 526.2 338 74.3
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 3.5e-147 525.4 338 74.6
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 5.9e-147 524.6 375 70.4
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.9e-147 524.6 344 73.0
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.0e-146 523.9 344 73.0
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.0e-146 523.9 340 73.8
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.2e-146 522.7 344 73.0
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 2.2e-146 522.7 347 74.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 5.0e-146 521.5 347 72.6
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 8.5e-146 520.8 347 72.3
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.1e-145 520.4 338 73.1
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.5e-145 520.0 345 72.5
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 4.2e-145 518.5 340 71.8
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 7.2e-145 517.7 344 72.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 9.4e-145 517.3 375 67.7
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 9.4e-145 517.3 347 71.5
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 2.1e-144 516.2 328 75.3
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 2.7e-144 515.8 363 70.8
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 6.1e-144 514.6 346 71.7
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 8.0e-144 514.2 347 72.6
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 8.0e-144 514.2 343 71.1
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 3.0e-143 512.3 343 70.6
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 2.0e-142 509.6 347 72.0
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 5.7e-142 508.1 352 70.2
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 7.5e-142 507.7 346 70.8
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.3e-141 506.9 346 71.4
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.8e-141 505.8 347 72.0
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 4.8e-141 505.0 282 85.5
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 4.8e-141 505.0 347 71.5
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 6.3e-141 504.6 345 70.7
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 8.3e-141 504.2 350 71.7
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 4.1e-140 501.9 349 71.6
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.6e-139 500.0 349 72.8
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 4.5e-139 498.4 346 69.7
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 5.9e-139 498.0 345 69.6
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 7.7e-139 497.7 340 69.1
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 7.7e-139 497.7 404 62.4
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 2.2e-138 496.1 351 67.8
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 8.5e-138 494.2 351 67.5
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 8.5e-138 494.2 334 73.4
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 6.1e-136 488.0 349 69.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 8.0e-136 487.6 346 69.9
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 5.2e-135 485.0 350 69.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 5.2e-135 485.0 350 69.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 1.2e-134 483.8 350 69.1
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 2.0e-134 483.0 349 69.9
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 4.4e-134 481.9 328 71.3
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 1.3e-133 480.3 351 67.8
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 2.2e-133 479.6 292 77.7
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 6.3e-133 478.0 343 68.2
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 8.3e-133 477.6 347 68.6
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 2.7e-131 472.6 345 67.5
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 3.5e-131 472.2 345 67.8
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 2.9e-130 469.2 344 64.2
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 6.6e-130 468.0 347 66.6
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.9e-129 466.5 344 66.6
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 4.3e-129 465.3 350 65.4
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 5.6e-129 464.9 343 65.9
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 7.3e-129 464.5 301 75.1
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 9.5e-129 464.2 324 69.8
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 8.0e-120 434.5 334 65.9
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.3e-117 427.2 247 80.6
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.7e-117 426.8 251 81.3
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 6.4e-117 424.9 333 63.7
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 6.4e-117 424.9 234 84.2
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.6e-112 409.1 249 75.9
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.5e-110 403.7 249 75.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.1e-105 387.5 305 62.0
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 8.1e-104 381.3 330 60.3
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 2.7e-99 366.3 333 58.9
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.5e-97 360.5 328 56.1
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.5e-94 350.5 239 72.0
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 2.6e-94 349.7 232 72.0
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 4.9e-93 345.5 240 70.4
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 6.4e-93 345.1 241 69.3
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 8.4e-93 344.7 241 69.3
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.3e-90 337.4 240 68.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.5e-86 323.9 326 53.4
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 2.3e-82 310.1 244 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.2e-69 266.9 173 72.3
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.4e-63 247.7 199 61.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.5e-62 244.2 163 71.2
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 2.0e-62 243.8 199 61.8
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 2.7e-59 233.4 246 47.2
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 2.6e-54 216.9 205 51.7
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 2.1e-51 207.2 180 57.2
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.8e-48 196.1 172 59.3
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.7e-27 127.1 73 82.2
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 3.0e-26 123.6 79 72.2
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 4.4e-17 93.2 57 68.4
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 7.5e-09 65.9 53 60.4


User provided reference genes

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