Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.1e-278 962.6 478 100.0
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 7.1e-225 783.9 462 84.2
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.1e-220 770.0 439 86.1
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.3e-215 752.3 429 86.2
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.1e-212 743.4 444 81.5
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.2e-210 735.7 445 82.0
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.9e-209 732.6 446 81.4
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 3.0e-207 725.3 442 79.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.3e-205 719.9 465 77.0
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 3.7e-205 718.4 429 80.0
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 4.8e-205 718.0 435 79.3
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.8e-205 718.0 461 77.4
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.1e-204 715.3 438 79.9
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 9.1e-204 713.8 446 79.8
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 7.7e-203 710.7 445 77.8
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.7e-203 710.7 435 80.7
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 1.1e-201 706.8 443 78.3
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.1e-201 706.8 438 80.8
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 1.4e-201 706.4 458 78.2
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 2.5e-201 705.7 425 80.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 5.5e-201 704.5 425 80.0
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.2e-200 703.4 443 78.3
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.2e-200 703.4 450 77.8
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.6e-200 703.0 450 76.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.1e-200 702.6 467 75.2
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 6.1e-200 701.0 460 75.4
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.4e-199 699.9 422 80.3
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 3.0e-199 698.7 440 78.0
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.9e-199 698.4 422 80.1
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.1e-198 696.8 487 71.7
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.0e-198 696.0 442 76.2
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.4e-198 694.9 422 79.9
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 5.7e-198 694.5 457 74.8
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.3e-197 693.3 460 74.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.1e-196 690.3 422 79.6
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.4e-196 689.9 457 75.9
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.3e-196 688.0 445 76.2
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 7.0e-196 687.6 463 74.1
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 7.0e-196 687.6 460 73.9
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 7.0e-196 687.6 435 77.7
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.0e-196 687.6 422 78.0
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 2.0e-195 686.0 434 77.2
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 2.0e-195 686.0 440 76.1
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.6e-195 685.6 447 75.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.6e-195 685.6 440 76.8
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 5.0e-194 681.4 423 79.2
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 8.5e-194 680.6 479 70.8
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 1.1e-193 680.2 447 76.1
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.5e-193 679.1 440 76.4
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 4.7e-192 674.9 421 76.7
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 8.0e-192 674.1 422 77.7
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 1.0e-191 673.7 440 73.6
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.4e-191 673.3 421 76.0
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 8.8e-191 670.6 455 73.6
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.4e-190 668.3 421 75.5
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.2e-189 666.0 421 75.3
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 2.2e-189 666.0 421 75.3
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 2.8e-189 665.6 446 72.9
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 2.8e-189 665.6 453 74.0
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 4.8e-189 664.8 483 68.7
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.1e-188 663.7 422 76.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.9e-185 652.9 534 63.5
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 8.0e-184 647.5 437 72.5
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 4.4e-182 641.7 479 69.3
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.7e-181 639.8 431 74.2
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 5.4e-180 634.8 440 72.7
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 2.0e-179 632.9 438 74.7
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.7e-179 632.5 384 80.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.3e-178 630.2 378 81.2
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 1.9e-177 626.3 380 80.0
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.0e-175 618.6 382 78.8
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 5.2e-175 618.2 435 69.9
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 6.8e-175 617.8 384 78.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.0e-174 616.3 383 76.8
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 4.1e-172 608.6 452 68.6
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 9.1e-172 607.4 378 76.2
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 6.1e-168 594.7 425 69.9
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 3.4e-166 589.0 443 67.9
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.4e-165 584.7 336 84.8
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.0e-162 575.9 459 65.8
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 3.3e-161 572.4 392 71.9
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 9.5e-161 570.9 433 67.7
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.7e-154 550.1 444 64.4
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 5.0e-154 548.5 435 64.6
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.6e-152 543.5 351 74.9
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 5.8e-150 535.0 403 66.3
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 2.1e-147 526.6 420 61.7
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 3.5e-147 525.8 419 60.9
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 6.8e-143 511.5 313 79.2
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 4.4e-142 508.8 326 73.9
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.9e-132 476.9 433 56.8
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 7.8e-131 471.5 455 56.0
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 5.8e-118 428.7 247 80.2
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 5.3e-111 405.6 463 47.7
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.4e-103 380.9 246 74.8
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.3e-96 357.8 312 60.9
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 4.8e-96 355.9 312 60.9
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 3.8e-93 346.3 438 45.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 5.5e-92 342.4 202 78.7
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 2.5e-84 317.0 293 53.6
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 7.7e-78 295.4 224 68.3
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 3.8e-69 266.5 211 64.9
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.8e-64 250.4 179 69.3
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 4.7e-59 233.0 192 64.1
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.8e-58 231.1 307 47.6
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 4.4e-57 226.5 439 37.8
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 6.6e-37 159.5 109 65.1
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.3e-32 145.2 85 84.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 4.6e-30 136.7 93 74.2
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 2.5e-28 131.0 89 71.9
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 6.9e-18 96.3 54 79.6
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 3.3e-12 77.4 42 88.1
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.9e-07 61.6 58 51.7


User provided reference genes

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