Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044626 Camellia sinensis var. sinensis HOM05D006336 ORTHO05D007819 7.1e-43 176.8 85 100.0
CSS0028971 Camellia sinensis var. sinensis HOM05D006336 ORTHO05D007819 8.4e-28 126.7 67 95.5
MELO3C016932.2 Cucumis melo HOM05D006336 ORTHO05D007819 2.7e-26 121.7 68 85.3
ClCG05G015960 Citrullus lanatus HOM05D006336 ORTHO05D007819 3.5e-26 121.3 67 86.6
Dinv09419 Davidia involucrata HOM05D006336 ORTHO05D007819 6.0e-26 120.6 67 86.6
Lalb_Chr24g0393711 Lupinus albus HOM05D006336 ORTHO05D007819 7.9e-26 120.2 67 86.6
CsaV3_4G036230 Cucumis sativus L. HOM05D006336 ORTHO05D007819 1.0e-25 119.8 67 85.1
Rhsim03G0050100 Rhododendron simsii HOM05D006336 ORTHO05D007819 1.0e-25 119.8 67 86.6
Sed0027870 Sechium edule HOM05D006336 ORTHO05D007819 1.8e-25 119.0 68 82.4
Atru.chr7.1812 Acer truncatum HOM05D006336 ORTHO05D007819 2.3e-25 118.6 67 85.1
arahy.Tifrunner.gnm1.ann1.6DI6VD Arachis hypogaea HOM05D006336 ORTHO05D007819 3.0e-25 118.2 67 83.6
Aqoxy7G04150 Aquilegia oxysepala HOM05D006336 ORTHO05D007819 5.1e-25 117.5 67 82.1
Duzib187G1166 Durio zibethinus HOM05D006336 ORTHO05D007819 5.1e-25 117.5 67 82.1
TAR636G2611 Trochodendron aralioides HOM05D006336 ORTHO05D007819 5.1e-25 117.5 67 85.1
PSO135G0459 Papaver somniferum HOM05D006336 ORTHO05D007819 6.7e-25 117.1 68 82.4
PGR044G0762 Punica granatum HOM05D006336 ORTHO05D007819 6.7e-25 117.1 66 81.8
Nn6g35635 Nelumbo nucifera HOM05D006336 ORTHO05D007819 1.5e-24 115.9 67 83.6
CANSAT25G0260 Cannabis sativa HOM05D006336 ORTHO05D007819 1.9e-24 115.5 67 82.1
COL.COLO4_21171 Corchorus olitorius HOM05D006336 ORTHO05D007819 1.9e-24 115.5 67 82.1
Potri.006G217700 Populus trichocarpa HOM05D006336 ORTHO05D007819 1.9e-24 115.5 67 82.1
Carub.0005s0929 Capsella rubella HOM05D006336 ORTHO05D007819 2.5e-24 115.2 67 80.6
Hma1.2p1_0262F.1_g105216 Hydrangea macrophylla HOM05D006336 ORTHO05D007819 2.5e-24 115.2 70 78.6
Thecc.09G066700 Theobroma cacao HOM05D006336 ORTHO05D007819 3.3e-24 114.8 67 79.1
TWI32G0525 Tripterygium wilfordii HOM05D006336 ORTHO05D007819 4.3e-24 114.4 67 80.6
MSTRG.11848 Avicennia marina HOM05D006336 ORTHO05D007819 5.6e-24 114.0 67 77.6
Thhalv10002575m.g Eutrema salsugineum HOM05D006336 ORTHO05D007819 5.6e-24 114.0 67 79.1
AL5G21500 Arabidopsis lyrata HOM05D006336 ORTHO05D007819 7.4e-24 113.6 67 77.6
Lj5g0013864 Lotus japonicus HOM05D006336 ORTHO05D007819 7.4e-24 113.6 67 79.1
Aa31LG4G13380 Aethionema arabicum HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 79.1
Migut.A00484 Erythranthe guttata HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 77.6
Glyma.17G220200 Glycine max HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 80.6
Gohir.A06G081300 Gossypium hirsutum HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 80.6
Gohir.D06G080900 Gossypium hirsutum HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 80.6
Manes.03G055500 Manihot esculenta HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 77.6
Phvul.001G044100 Phaseolus vulgaris HOM05D006336 ORTHO05D007819 9.6e-24 113.2 67 80.6
AT3G43540 Arabidopsis thaliana HOM05D006336 ORTHO05D007819 1.3e-23 112.8 67 77.6
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 1.6e-23 112.5 67 77.6
RcHm_v2.0_Chr6g0304731 Rosa chinensis HOM05D006336 ORTHO05D007819 1.6e-23 112.5 67 79.1
Sp5g17620 Schrenkiella parvula HOM05D006336 ORTHO05D007819 1.6e-23 112.5 67 77.6
unitig_32.g10956 Utricularia gibba HOM05D006336 ORTHO05D007819 1.6e-23 112.5 66 78.8
BcaC01g02096 Brassica carinata HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
A06p22570 Brassica napus HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
C03p68560 Brassica napus HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
BolC3t19114H Brassica oleracea HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
BraA06t25331Z Brassica rapa HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
Eucgr.C03178 Eucalyptus grandis HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
FvH4_2g37050 Fragaria vesca HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
FAN27G0198 Fragaria x ananassa HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
Gorai.010G094300 Gossypium raimondii HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 79.1
HanXRQChr03g0084651 Helianthus annuus HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
GSVIVG01035507001 Vitis vinifera HOM05D006336 ORTHO05D007819 2.1e-23 112.1 67 77.6
Lj8C369G2 Lonicera japonica HOM05D006336 ORTHO05D007819 2.8e-23 111.7 67 79.1
Medtr1g014730 Medicago truncatula HOM05D006336 ORTHO05D007819 2.8e-23 111.7 65 78.5
arahy.Tifrunner.gnm1.ann1.YUGK7S Arachis hypogaea HOM05D006336 ORTHO05D007819 3.7e-23 111.3 67 80.6
Lsat_1_v5_gn_6_74301 Lactuca sativa HOM05D006336 ORTHO05D007819 3.7e-23 111.3 67 77.6
MD08G1047000 Malus domestica HOM05D006336 ORTHO05D007819 4.8e-23 110.9 67 76.1
Sc04g0003070 Simmondsia chinensis HOM05D006336 ORTHO05D007819 4.8e-23 110.9 67 79.1
Zm00001eb313900 Zea mays HOM05D006336 ORTHO05D007819 4.8e-23 110.9 67 74.6
CARHR098720 Cardamine hirsuta HOM05D006336 ORTHO05D007819 6.2e-23 110.5 67 76.1
CiPaw.13G138600 Carya illinoinensis HOM05D006336 ORTHO05D007819 6.2e-23 110.5 68 73.5
ECA240G3698 Erigeron canadensis HOM05D006336 ORTHO05D007819 6.2e-23 110.5 67 77.6
BcaB01g01223 Brassica carinata HOM05D006336 ORTHO05D007819 1.1e-22 109.8 67 76.1
THA.LOC104799597 Tarenaya hassleriana HOM05D006336 ORTHO05D007819 1.1e-22 109.8 67 74.6
TPR.G38941 Trifolium pratense HOM05D006336 ORTHO05D007819 1.1e-22 109.8 65 78.5
VMungo0647G1288 Vigna mungo HOM05D006336 ORTHO05D007819 1.1e-22 109.8 67 77.6
Ca_13088_v3 Cicer arietinum L. HOM05D006336 ORTHO05D007819 1.4e-22 109.4 65 78.5
Psat6g024200 Pisum sativum HOM05D006336 ORTHO05D007819 1.4e-22 109.4 65 78.5
Cfa017842 Carpinus fangiana HOM05D006336 ORTHO05D007819 1.8e-22 109.0 67 74.6
Oeu047793.1 Olea europaea HOM05D006336 ORTHO05D007819 2.4e-22 108.6 67 73.1
vmacro07660 Vaccinium macrocarpon HOM05D006336 ORTHO05D007819 2.4e-22 108.6 75 74.7
ATR0681G177 Amborella trichopoda HOM05D006336 ORTHO05D007819 3.1e-22 108.2 67 73.1
MBI13_g01670_MAGBIO Magnolia biondii HOM05D006336 ORTHO05D007819 4.0e-22 107.8 75 70.7
Lsat_1_v5_gn_3_5840 Lactuca sativa HOM05D006336 ORTHO05D007819 9.0e-22 106.7 67 74.6
Dinv37442 Davidia involucrata HOM05D006336 ORTHO05D007819 1.2e-21 106.3 67 77.6
Sabra06G0167900 Salix brachista HOM05D006336 ORTHO05D007819 1.2e-21 106.3 78 69.2
EL10Ac5g11099 Beta vulgaris HOM05D006336 ORTHO05D007819 1.5e-21 105.9 67 74.6
Lsat_1_v5_gn_6_25780 Lactuca sativa HOM05D006336 ORTHO05D007819 2.0e-21 105.5 65 76.9
SalBow4G0695 Salvia bowleyana HOM05D006336 ORTHO05D007819 2.6e-21 105.1 67 71.6
SGA_v2.0_scaffold89G27365 Striga asiatica HOM05D006336 ORTHO05D007819 3.4e-21 104.8 70 70.0
Cpa.g.sc82.21 Carica papaya HOM05D006336 ORTHO05D007819 7.6e-21 103.6 67 73.1
Ah.11g048000 Amaranthus hybridus HOM05D006336 ORTHO05D007819 1.7e-20 102.4 67 67.2
CDE05G3418 Ceratophyllum demersum HOM05D006336 ORTHO05D007819 2.9e-20 101.7 63 74.6
Nitab4.5_0008763g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 6.5e-20 100.5 67 74.6
HPP92_019279 Vanilla planifolia HOM05D006336 ORTHO05D007819 6.5e-20 100.5 67 65.7
DCAR_002185 Daucus carota HOM05D006336 ORTHO05D007819 8.4e-20 100.1 77 67.5
CAN.G22.30 Capsicum annuum HOM05D006336 ORTHO05D007819 1.9e-19 99.0 67 73.1
Solyc08g075100.4 Solanum lycopersicum HOM05D006336 ORTHO05D007819 4.2e-19 97.8 68 72.1
Hund02606 Selenicereus undatus HOM05D006336 ORTHO05D007819 5.5e-19 97.4 67 67.2
Sopen08g023730 Solanum pennellii HOM05D006336 ORTHO05D007819 5.5e-19 97.4 67 73.1
PGSC0003DMG400020816 Solanum tuberosum HOM05D006336 ORTHO05D007819 5.5e-19 97.4 67 73.1
PGSC0003DMG400020818 Solanum tuberosum HOM05D006336 ORTHO05D007819 5.5e-19 97.4 67 73.1
Cc08_g04580 Coffea canephora HOM05D006336 ORTHO05D007819 2.1e-18 95.5 62 74.2
AUR62021599 Chenopodium quinoa HOM05D006336 ORTHO05D007819 7.4e-16 87.0 107 45.8
Ah.01g016210 Amaranthus hybridus HOM05D006336 ORTHO05D007819 8.2e-15 83.6 98 48.0
HPP92_019317 Vanilla planifolia HOM05D006336 ORTHO05D007819 1.4e-14 82.8 70 57.1
Ciclev10010538m.g Citrus clementina HOM05D006336 ORTHO05D007819 2.6e-13 78.6 42 88.1
AUR62008497 Chenopodium quinoa HOM05D006336 ORTHO05D007819 1.3e-12 76.3 58 63.8
Cc08_g04520 Coffea canephora HOM05D006336 ORTHO05D007819 1.7e-12 75.9 43 81.4
Psat6g117360 Pisum sativum HOM05D002321 ORTHO05D007292 2.9e-12 75.1 44 75.0
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis HOM05D006336 ORTHO05D007819 5.0e-12 74.3 68 50.0
Nitab4.5_0024082g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 6.5e-12 73.9 42 81.0
Haze_18366 Corylus avellana HOM05D006336 ORTHO05D007819 8.5e-12 73.6 42 83.3
Pp3c1_38250 Physcomitrium patens HOM05D006336 ORTHO05D007819 8.5e-12 73.6 68 51.5
Peaxi162Scf00014g01816 Petunia axillaris HOM05D006336 ORTHO05D007819 1.4e-11 72.8 43 76.7
SMO351G0262 Selaginella moellendorffii HOM05D006336 ORTHO05D007819 1.4e-11 72.8 64 56.2
Mapoly0124s0049 Marchantia polymorpha HOM05D006336 ORTHO05D007819 2.5e-11 72.0 63 52.4
Psat2g081640 Pisum sativum HOM05D003172 ORTHO05D003708 4.2e-11 71.2 43 69.8
Psat7g236400 Pisum sativum HOM05D002716 ORTHO05D003324 2.1e-10 68.9 44 70.5
TAR624G1124 Trochodendron aralioides HOM05D006336 ORTHO05D007819 6.1e-10 67.4 67 56.7
CBR_g30757 Chara braunii HOM05D006336 ORTHO05D007819 1.7e-07 59.3 73 42.5
Glyma.06G258800 Glycine max HOM05D006336 ORTHO05D007819 6.3e-07 57.4 36 75.0


User provided reference genes

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