Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.7e-115 419.5 227 100.0
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 3.5e-105 385.2 243 88.5
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 6.0e-105 384.4 243 88.5
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 1.9e-87 326.2 243 74.5
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 3.3e-87 325.5 243 74.5
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 1.6e-86 323.2 243 72.8
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 3.6e-86 322.0 243 73.7
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.1e-85 320.5 241 73.4
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 1.4e-85 320.1 243 73.3
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 2.4e-85 319.3 243 73.3
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 6.9e-85 317.8 243 72.8
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.2e-84 317.0 237 73.8
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 7.6e-84 314.3 235 75.3
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 5.4e-82 308.1 243 71.6
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 7.1e-82 307.8 239 73.2
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 9.3e-82 307.4 243 72.4
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 3.5e-81 305.4 242 70.7
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 7.9e-81 304.3 243 70.8
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 1.0e-80 303.9 243 70.8
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 1.0e-80 303.9 243 69.1
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 2.3e-80 302.8 243 71.2
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 3.0e-80 302.4 243 70.4
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 3.9e-80 302.0 242 69.8
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 5.1e-80 301.6 244 70.9
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 6.7e-80 301.2 261 67.4
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 6.7e-80 301.2 242 69.8
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 5.6e-79 298.1 244 68.9
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 7.4e-79 297.7 239 69.5
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 7.4e-79 297.7 242 69.8
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 7.4e-79 297.7 242 69.8
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 9.6e-79 297.4 241 69.7
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 1.3e-78 297.0 242 69.4
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 1.3e-78 297.0 242 69.8
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.1e-78 296.2 242 69.4
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 2.1e-78 296.2 241 69.7
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 6.2e-78 294.7 243 69.1
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.8e-77 293.1 242 69.8
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 1.8e-77 293.1 242 68.2
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 3.1e-77 292.4 244 69.3
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 5.3e-77 291.6 243 68.7
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 6.9e-77 291.2 240 68.8
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 2.0e-76 289.7 243 66.3
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.0e-76 289.7 242 68.2
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 2.0e-76 289.7 243 67.1
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 5.8e-76 288.1 236 69.1
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.7e-75 286.6 245 67.3
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 2.9e-75 285.8 238 65.5
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 2.9e-75 285.8 250 65.6
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 3.8e-75 285.4 241 65.6
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 4.9e-75 285.0 241 65.1
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 6.5e-75 284.6 231 68.0
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 6.5e-75 284.6 241 65.1
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 6.5e-75 284.6 238 65.5
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 6.5e-75 284.6 243 65.4
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 8.4e-75 284.3 241 65.1
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 1.1e-74 283.9 263 61.6
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 1.1e-74 283.9 236 66.9
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 1.4e-74 283.5 241 65.6
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 1.9e-74 283.1 243 65.8
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 2.5e-74 282.7 241 65.6
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 7.1e-74 281.2 238 65.5
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 9.3e-74 280.8 241 64.3
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 1.2e-73 280.4 237 65.4
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 2.1e-73 279.6 241 64.7
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.7e-73 279.3 241 63.9
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.7e-73 279.3 241 63.9
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 2.7e-73 279.3 241 64.3
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 6.0e-73 278.1 241 63.9
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 7.9e-73 277.7 241 65.6
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 1.0e-72 277.3 241 63.5
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 1.0e-72 277.3 242 66.5
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 1.0e-72 277.3 240 63.8
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.0e-72 277.3 243 64.6
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 1.8e-72 276.6 291 58.4
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 3.0e-72 275.8 242 65.7
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 3.9e-72 275.4 241 64.7
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 3.9e-72 275.4 241 65.1
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 5.1e-72 275.0 236 64.0
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 5.1e-72 275.0 242 64.5
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 6.7e-72 274.6 241 63.9
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 1.1e-71 273.9 242 63.2
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 1.1e-71 273.9 241 63.9
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 1.5e-71 273.5 241 63.9
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 5.7e-71 271.6 243 64.2
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 1.3e-70 270.4 223 66.8
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 1.3e-70 270.4 242 64.0
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 2.8e-70 269.2 207 75.4
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 2.8e-70 269.2 241 61.8
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 1.8e-69 266.5 239 61.1
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 3.1e-69 265.8 243 65.0
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 4.1e-69 265.4 236 63.6
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 9.0e-69 264.2 254 60.6
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 5.5e-66 255.0 209 70.8
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 6.3e-62 241.5 225 60.9
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 9.0e-61 237.7 244 55.3
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 2.6e-60 236.1 239 56.1
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 2.5e-58 229.6 239 55.2
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 3.2e-58 229.2 244 53.7
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 5.5e-58 228.4 178 74.2
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 6.9e-53 211.5 251 52.6
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.6e-52 209.5 342 43.0
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 2.4e-45 186.4 242 47.1
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 2.2e-38 163.3 240 42.5
Sc21g0005380 Simmondsia chinensis HOM05D005589 ORTHO05D006948 7.7e-36 154.8 116 72.4
BcaB01g01018 Brassica carinata HOM05D005589 ORTHO05D006948 1.6e-33 147.1 119 66.4
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 1.2e-31 141.0 252 38.9
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 8.3e-30 134.8 179 46.9
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 7.2e-26 121.7 206 39.3
ATR0759G057 Amborella trichopoda HOM05D005589 ORTHO05D006948 1.6e-25 120.6 101 64.4
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 1.7e-22 110.5 206 39.3
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 1.6e-20 104.0 119 53.8
SEGI_34947 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 1.8e-16 90.5 93 59.1
arahy.Tifrunner.gnm1.ann1.35TLEJ Arachis hypogaea HOM05D005589 ORTHO05D006948 4.9e-14 82.4 119 46.2
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 2.0e-12 77.0 118 44.9
HanXRQChr10g0314321 Helianthus annuus HOM05D005589 ORTHO05D006948 5.6e-10 68.9 53 69.8
arahy.Tifrunner.gnm1.ann1.DV3IGD Arachis hypogaea HOM05D005589 ORTHO05D006948 8.0e-09 65.1 86 46.5
Actinidia37260 Actinidia chinensis HOM05D005589 ORTHO05D006948 2.3e-08 63.5 71 52.1
ATR0759G002 Amborella trichopoda HOM05D005589 ORTHO05D006948 3.4e-07 59.7 40 72.5
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 4.4e-07 59.3 240 25.0
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 2.2e-06 57.0 88 42.0
arahy.Tifrunner.gnm1.ann1.LY30IG Arachis hypogaea HOM05D005589 ORTHO05D006948 2.9e-06 56.6 141 36.2


User provided reference genes

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