Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044612 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 3.0e-30 134.4 64 100.0
Manes.18G005900 Manihot esculenta HOM05D004614 ORTHO05D005339 1.2e-07 59.3 29 93.1
Oeu056211.1 Olea europaea HOM05D004614 ORTHO05D005339 1.2e-07 59.3 28 92.9
Aa31LG8G13830 Aethionema arabicum HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Aqoxy6G01739 Aquilegia oxysepala HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
AL1G51310 Arabidopsis lyrata HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
AT1G42430 Arabidopsis thaliana HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
BcaB04g17805 Brassica carinata HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
BcaC07g37479 Brassica carinata HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
A08p07800 Brassica napus HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
C08p09450 Brassica napus HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
BolC8t47801H Brassica oleracea HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
BraA08t32800Z Brassica rapa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CSS0048285 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CANSAT25G1550 Cannabis sativa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Carub.0001s3422 Capsella rubella HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CARHR292380 Cardamine hirsuta HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Cpa.g.sc26.206 Carica papaya HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Cfa014064 Carpinus fangiana HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CiPaw.07G139400 Carya illinoinensis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CiPaw.08G072400 Carya illinoinensis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CDE02G2145 Ceratophyllum demersum HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
ClCG08G009480 Citrullus lanatus HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Ciclev10001231m.g Citrus clementina HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Cc10_g00730 Coffea canephora HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
COL.COLO4_04001 Corchorus olitorius HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
MELO3C026543.2 Cucumis melo HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
CsaV3_6G031620 Cucumis sativus L. HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
DCAR_016768 Daucus carota HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
ECA232G3530 Erigeron canadensis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Migut.C00954 Erythranthe guttata HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Eucgr.F03550 Eucalyptus grandis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Thhalv10004272m.g Eutrema salsugineum HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
FvH4_2g37530 Fragaria vesca HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
FAN15G3067 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
FAN20G3039 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
FAN27G1062 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Gohir.A05G179800 Gossypium hirsutum HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Gorai.009G188200 Gossypium raimondii HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
HanXRQChr05g0146811 Helianthus annuus HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Hma1.2p1_0507F.1_g168400 Hydrangea macrophylla HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Lsat_1_v5_gn_9_45021 Lactuca sativa HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
MD08G1002900 Malus domestica HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
MD15G1002600 Malus domestica HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Nn6g31744 Nelumbo nucifera HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Prupe.1G354900 Prunus persica HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
QL02p013984 Quercus lobata HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
RcHm_v2.0_Chr6g0304201 Rosa chinensis HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Sp1g32010 Schrenkiella parvula HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Sed0024410 Sechium edule HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
SGA_v2.0_scaffold275G46591 Striga asiatica HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
THA.LOC104813167 Tarenaya hassleriana HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Thecc.08G058000 Theobroma cacao HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
TWI56G0787 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
vmacro04401 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
GSVIVG01008677001 Vitis vinifera HOM05D004614 ORTHO05D005339 1.6e-07 58.9 28 92.9
Dinv25909 Davidia involucrata HOM05D004614 ORTHO05D005339 2.1e-07 58.5 28 89.3
Os03g0133300 Oryza sativa ssp. japonica HOM05D004614 ORTHO05D005339 2.8e-07 58.2 28 89.3
Actinidia37970 Actinidia chinensis HOM05D004614 ORTHO05D005339 3.6e-07 57.8 25 100.0
MD07G1011800 Malus domestica HOM05D004614 ORTHO05D005339 3.6e-07 57.8 25 100.0
Manes.05G134900 Manihot esculenta HOM05D004614 ORTHO05D005339 3.6e-07 57.8 28 89.3
Peaxi162Scf00064g01132 Petunia axillaris HOM05D004614 ORTHO05D005339 3.6e-07 57.8 28 89.3
Duzib093G0152 Durio zibethinus HOM05D004614 ORTHO05D005339 4.7e-07 57.4 28 89.3
HanXRQChr15g0492731 Helianthus annuus HOM05D004614 ORTHO05D005339 4.7e-07 57.4 29 89.7
Potri.002G011300 Populus trichocarpa HOM05D004614 ORTHO05D005339 4.7e-07 57.4 28 89.3
TAR381G0464 Trochodendron aralioides HOM05D004614 ORTHO05D005339 4.7e-07 57.4 29 89.7
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 4.7e-07 57.4 28 89.3
Actinidia29786 Actinidia chinensis HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Ca_15438_v3 Cicer arietinum L. HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Glyma.04G018400 Glycine max HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Glyma.06G018700 Glycine max HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Lj4A805T24 Lonicera japonica HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Lj1g0005022 Lotus japonicus HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Phvul.009G010200 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Psat5g011520 Pisum sativum HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
TPR.G38127 Trifolium pratense HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
TWI36G0356 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
VMungo1309G2703 Vigna mungo HOM05D004614 ORTHO05D005339 6.2e-07 57.0 28 89.3
Duzib041G0192 Durio zibethinus HOM05D004614 ORTHO05D005339 8.1e-07 56.6 28 89.3
PSO541G0908 Papaver somniferum HOM05D004614 ORTHO05D005339 8.1e-07 56.6 28 89.3
PSO675G0524 Papaver somniferum HOM05D004614 ORTHO05D005339 8.1e-07 56.6 28 89.3
Potri.005G249700 Populus trichocarpa HOM05D004614 ORTHO05D005339 8.1e-07 56.6 28 89.3
Rhsim07G0254700 Rhododendron simsii HOM05D004614 ORTHO05D005339 8.1e-07 56.6 26 92.3
Sabra05G0193200 Salix brachista HOM05D004614 ORTHO05D005339 8.1e-07 56.6 28 89.3
Ah.00g000370 Amaranthus hybridus HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
CAN.G311.111 Capsicum annuum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
AUR62036884 Chenopodium quinoa HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Duzib116G0199 Durio zibethinus HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Nitab4.5_0000588g0160 Nicotiana tabacum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Peaxi162Scf00893g00434 Petunia axillaris HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Solyc04g082290.4 Solanum lycopersicum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Solyc12g094570.1 Solanum lycopersicum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 85.7
Sopen04g035910 Solanum pennellii HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
Sopen12g031480 Solanum pennellii HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 85.7
PGSC0003DMG400009975 Solanum tuberosum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 89.3
PGSC0003DMG400029318 Solanum tuberosum HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 85.7
TAR376G0430 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.1e-06 56.2 28 85.7
ATR0661G410 Amborella trichopoda HOM05D004614 ORTHO05D005339 1.4e-06 55.8 28 85.7
Lj4A12T78 Lonicera japonica HOM05D004614 ORTHO05D005339 1.4e-06 55.8 25 96.0
MD11G1103700 Malus domestica HOM05D004614 ORTHO05D005339 1.4e-06 55.8 24 100.0
Medtr3g115210 Medicago truncatula HOM05D004614 ORTHO05D005339 1.4e-06 55.8 28 85.7
Phvul.L001638 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 1.4e-06 55.8 25 96.0
EL10Ac1g01976 Beta vulgaris HOM05D004614 ORTHO05D005339 1.8e-06 55.5 28 89.3
PGR031G0851 Punica granatum HOM05D004614 ORTHO05D005339 1.8e-06 55.5 28 89.3
Hund01763 Selenicereus undatus HOM05D004614 ORTHO05D005339 1.8e-06 55.5 28 85.7
unitig_82.g27116 Utricularia gibba HOM05D004614 ORTHO05D005339 1.8e-06 55.5 28 85.7
Gohir.A01G106500 Gossypium hirsutum HOM05D004614 ORTHO05D005339 2.3e-06 55.1 28 82.1
Gohir.D01G093000 Gossypium hirsutum HOM05D004614 ORTHO05D005339 2.3e-06 55.1 28 82.1
Gorai.002G118400 Gossypium raimondii HOM05D004614 ORTHO05D005339 2.3e-06 55.1 28 82.1
Nn5g30931 Nelumbo nucifera HOM05D004614 ORTHO05D005339 2.3e-06 55.1 28 85.7
SEGI_03937 Sequoiadendron giganteum HOM05D004614 ORTHO05D005339 3.1e-06 54.7 28 85.7
Sc15g0004500 Simmondsia chinensis HOM05D004614 ORTHO05D005339 3.1e-06 54.7 28 85.7
Lsat_1_v5_gn_2_6461 Lactuca sativa HOM05D004614 ORTHO05D005339 4.0e-06 54.3 25 92.0
Lalb_Chr11g0061661 Lupinus albus HOM05D004614 ORTHO05D005339 6.8e-06 53.5 28 82.1
TAR625G0334 Trochodendron aralioides HOM05D004614 ORTHO05D005339 8.9e-06 53.1 28 78.6


User provided reference genes

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