Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 2.0e-56 222.6 111 100.0
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 8.3e-55 217.2 111 98.2
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 8.1e-26 120.9 113 60.2
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 1.1e-25 120.6 121 57.0
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.1e-25 120.6 113 60.2
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 2.6e-24 115.9 110 58.2
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 7.6e-24 114.4 109 55.0
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 2.2e-23 112.8 110 56.4
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 2.9e-23 112.5 113 57.5
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 3.8e-23 112.1 115 55.7
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 1.4e-22 110.2 117 56.4
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 3.2e-22 109.0 106 56.6
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 4.2e-22 108.6 114 55.3
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 4.2e-22 108.6 113 57.5
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 7.1e-22 107.8 115 55.7
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 7.1e-22 107.8 114 58.8
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 2.7e-21 105.9 113 54.0
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 1.3e-20 103.6 113 53.1
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.7e-20 103.2 115 52.2
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 1.7e-20 103.2 110 54.5
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 3.0e-20 102.4 117 56.4
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 3.9e-20 102.1 115 49.6
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 5.1e-20 101.7 115 51.3
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 6.6e-20 101.3 115 52.2
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 8.7e-20 100.9 111 53.2
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.1e-19 100.5 107 54.2
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.5e-19 100.1 115 51.3
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.5e-19 99.4 107 54.2
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 4.3e-19 98.6 117 50.4
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.3e-18 97.1 122 50.8
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 2.8e-18 95.9 120 48.3
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 3.6e-18 95.5 125 47.2
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 4.8e-18 95.1 116 45.7
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 8.1e-18 94.4 110 53.6
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.8e-17 93.2 118 47.5
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 2.4e-17 92.8 66 66.7
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 2.4e-17 92.8 118 49.2
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 2.4e-17 92.8 111 48.6
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.1e-17 92.4 123 47.2
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 3.1e-17 92.4 119 47.1
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.3e-17 91.7 88 54.5
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 5.3e-17 91.7 122 47.5
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 6.9e-17 91.3 121 48.8
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 9.0e-17 90.9 121 47.9
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.2e-16 90.5 110 46.4
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.5e-16 90.1 122 48.4
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.5e-16 90.1 123 44.7
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.6e-16 89.4 131 45.8
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 2.6e-16 89.4 108 52.8
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.6e-16 89.4 123 44.7
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 2.6e-16 89.4 116 49.1
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 3.4e-16 89.0 110 47.3
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 3.4e-16 89.0 111 49.5
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 4.5e-16 88.6 110 48.2
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 4.5e-16 88.6 119 45.4
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 5.8e-16 88.2 104 51.9
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.8e-16 88.2 123 45.5
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.8e-16 88.2 123 45.5
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.8e-16 88.2 123 45.5
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 5.8e-16 88.2 116 49.1
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 7.6e-16 87.8 120 50.0
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.6e-16 87.8 123 44.7
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 7.6e-16 87.8 111 48.6
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.9e-16 87.4 123 44.7
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 1.7e-15 86.7 124 50.0
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.7e-15 86.7 123 44.7
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.2e-15 86.3 123 44.7
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 2.2e-15 86.3 83 51.8
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 3.8e-15 85.5 60 65.0
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 3.8e-15 85.5 126 42.1
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.8e-15 85.5 123 43.9
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.1e-14 84.0 70 55.7
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.1e-14 84.0 67 62.7
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.4e-14 83.6 126 38.9
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 4.2e-14 82.0 123 42.3
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 7.1e-14 81.3 126 41.3
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 9.3e-14 80.9 123 41.5
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.2e-13 80.5 120 45.8
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 1.2e-13 80.5 124 41.9
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 1.6e-13 80.1 124 41.1
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 2.1e-13 79.7 128 40.6
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 2.1e-13 79.7 67 55.2
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 3.5e-13 79.0 63 60.3
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 4.6e-13 78.6 126 39.7
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 4.6e-13 78.6 126 39.7
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 6.0e-13 78.2 126 37.3
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 7.9e-13 77.8 126 39.7
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 7.9e-13 77.8 126 39.7
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 7.9e-13 77.8 126 39.7
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 1.3e-12 77.0 55 58.2
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.8e-12 76.6 113 40.7
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.8e-12 76.6 114 44.7
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.3e-12 76.3 126 38.9
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 6.7e-12 74.7 111 37.8
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 1.1e-11 73.9 56 57.1
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 2.5e-11 72.8 121 38.0
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 4.3e-11 72.0 110 41.8
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.8e-09 66.6 113 42.5
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 3.1e-09 65.9 96 38.5
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 9.9e-08 60.8 111 36.0
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 1.9e-06 56.6 75 38.7


User provided reference genes

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