Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.5e-106 388.3 192 100.0
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 3.7e-71 271.9 194 73.7
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.7e-65 250.8 183 71.0
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 7.4e-64 247.7 200 70.5
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 9.7e-64 247.3 196 66.3
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.2e-63 246.1 189 68.3
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 2.4e-62 242.7 196 65.8
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 4.1e-62 241.9 187 65.8
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.1e-62 241.9 192 67.2
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 4.1e-62 241.9 196 65.3
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 9.0e-62 240.7 199 66.3
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.2e-61 240.4 201 65.7
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.5e-61 240.0 193 64.8
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.5e-61 240.0 197 64.0
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.6e-61 239.2 186 65.1
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 5.9e-61 238.0 186 64.5
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.9e-61 238.0 186 64.5
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.0e-60 237.3 203 64.5
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 3.8e-60 235.3 192 63.5
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 3.8e-60 235.3 187 64.7
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.0e-60 235.0 186 64.5
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 5.0e-60 235.0 195 63.6
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 6.5e-60 234.6 189 65.1
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.1e-59 233.8 193 64.8
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.4e-59 233.4 191 62.3
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.4e-59 233.4 189 62.4
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.9e-59 233.0 188 64.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.5e-59 232.6 196 61.2
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 4.2e-59 231.9 189 66.1
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 4.2e-59 231.9 190 64.2
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 5.5e-59 231.5 184 64.1
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.6e-58 229.9 196 63.3
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.1e-58 229.6 140 76.4
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.6e-58 228.8 197 60.9
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 6.1e-58 228.0 192 62.5
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.8e-57 226.5 151 73.5
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.8e-57 226.5 145 71.7
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 3.0e-57 225.7 191 63.9
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 5.1e-57 224.9 183 62.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 6.7e-57 224.6 192 60.9
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.7e-57 224.6 207 58.0
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 8.8e-57 224.2 145 74.5
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 8.8e-57 224.2 183 62.8
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.1e-56 223.8 186 66.1
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.5e-56 223.4 196 61.7
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.5e-56 223.4 189 61.4
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.5e-56 222.6 198 61.6
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 3.3e-56 222.2 140 73.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 3.3e-56 222.2 190 63.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 4.3e-56 221.9 189 63.0
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 4.3e-56 221.9 187 61.5
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 5.7e-56 221.5 204 59.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 7.4e-56 221.1 195 62.1
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.7e-55 219.9 192 60.4
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.7e-55 219.9 197 59.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.8e-55 218.4 185 60.5
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 4.8e-55 218.4 188 63.8
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 6.3e-55 218.0 203 61.1
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 6.3e-55 218.0 192 61.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.4e-54 216.1 190 62.6
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 3.1e-54 215.7 182 62.6
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 5.3e-54 214.9 188 61.7
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 6.9e-54 214.5 188 61.7
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 6.9e-54 214.5 187 61.0
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 9.1e-54 214.2 111 91.0
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-53 213.8 182 61.5
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-53 213.8 188 61.2
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.2e-53 213.8 191 61.8
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.5e-53 213.4 188 60.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.6e-53 212.6 179 62.6
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 3.4e-53 212.2 124 76.6
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 3.4e-53 212.2 194 59.8
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 4.5e-53 211.8 188 61.2
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 4.5e-53 211.8 196 60.2
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 5.9e-53 211.5 182 61.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 7.7e-53 211.1 137 72.3
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 7.7e-53 211.1 194 59.3
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.7e-52 209.9 191 59.2
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.7e-52 209.9 191 59.2
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.9e-52 209.1 124 75.0
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 5.0e-52 208.4 168 60.7
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 5.0e-52 208.4 192 58.9
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 8.5e-52 207.6 124 75.0
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.1e-51 207.2 193 57.0
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.4e-51 206.8 124 75.0
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.4e-51 206.8 191 57.1
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.5e-51 206.1 124 74.2
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 4.2e-51 205.3 205 53.7
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 5.5e-51 204.9 146 66.4
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 7.2e-51 204.5 188 59.0
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.6e-50 203.4 161 62.1
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 2.7e-50 202.6 151 73.5
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.7e-50 201.8 153 70.6
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.7e-50 201.8 189 59.3
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.0e-49 200.7 167 60.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.3e-49 199.5 219 51.6
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 3.9e-49 198.7 123 71.5
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.0e-48 196.4 202 56.4
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.3e-47 193.7 153 68.6
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.7e-47 193.4 165 61.2
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.7e-47 192.2 223 54.7
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 8.2e-47 191.0 192 54.2
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.1e-46 190.7 134 66.4
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 4.5e-45 185.3 116 74.1
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 4.5e-45 185.3 136 62.5
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.9e-45 184.9 116 70.7
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.7e-44 183.3 113 74.3
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 6.5e-44 181.4 112 73.2
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.4e-43 180.3 163 56.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.3e-39 167.2 91 85.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 2.2e-39 166.4 118 75.4
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 6.3e-39 164.9 115 67.8
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.8e-38 163.3 151 61.6
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.2e-37 160.6 122 64.8
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.6e-37 160.2 133 54.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 2.6e-37 159.5 123 60.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 1.4e-33 147.1 93 72.0
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 4.0e-33 145.6 109 64.2
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 5.2e-33 145.2 145 57.9
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 4.8e-31 138.7 109 60.6
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 6.3e-31 138.3 90 65.6
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.7e-28 130.2 85 76.5
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 5.0e-28 128.6 126 46.0
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.5e-27 126.3 73 76.7
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.2e-26 124.0 116 50.9
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 4.1e-22 109.0 97 52.6
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 2.0e-21 106.7 112 53.6
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.1e-19 100.9 111 45.0
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 7.2e-19 98.2 91 56.0
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.3e-15 87.4 112 40.2
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.7e-15 87.0 128 43.0
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.2e-13 80.9 133 42.9
Hma1.2p1_3430F.1_g335990 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 5.6e-11 72.0 87 57.5
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 7.3e-11 71.6 42 81.0
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 6.8e-09 65.1 69 55.1
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 4.9e-07 58.9 150 30.7


User provided reference genes

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