Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 2.7e-108 395.2 183 100.0
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 3.4e-66 255.4 146 80.1
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 4.4e-66 255.0 146 79.5
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 4.9e-65 251.5 138 82.6
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.2e-64 248.8 146 77.4
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.2e-63 246.9 144 77.1
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 2.0e-63 246.1 148 77.0
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 7.8e-63 244.2 148 77.0
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.5e-61 240.0 194 61.9
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.9e-61 239.6 146 74.7
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 3.3e-61 238.8 116 87.1
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 5.6e-61 238.0 147 74.1
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.4e-59 233.4 142 73.2
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.1e-59 232.3 138 76.1
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 8.9e-59 230.7 146 73.3
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.5e-58 229.9 148 73.0
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 2.6e-58 229.2 151 70.2
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 2.6e-58 229.2 105 93.3
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 5.8e-58 228.0 162 69.1
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.4e-56 222.6 144 71.5
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 4.1e-56 221.9 149 69.1
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 5.4e-56 221.5 147 66.7
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.6e-55 219.9 150 68.0
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 1.6e-55 219.9 149 68.5
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 2.7e-55 219.2 147 68.0
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 3.5e-55 218.8 149 65.1
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 3.5e-55 218.8 152 67.1
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 4.6e-55 218.4 105 85.7
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 6.0e-55 218.0 146 69.2
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.0e-54 217.2 146 68.5
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.0e-54 217.2 147 70.1
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 6.6e-54 214.5 150 66.0
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 1.1e-53 213.8 146 66.4
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 1.5e-53 213.4 151 67.5
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 1.9e-53 213.0 142 64.8
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 5.6e-53 211.5 124 71.8
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 9.5e-53 210.7 126 73.8
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.2e-52 210.3 105 82.9
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 1.6e-52 209.9 127 72.4
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.1e-52 209.5 147 65.3
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.1e-52 209.5 148 66.9
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 2.8e-52 209.1 157 63.1
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 3.6e-52 208.8 146 62.3
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 4.7e-52 208.4 146 65.8
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 6.2e-52 208.0 125 68.8
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 3.1e-51 205.7 148 63.5
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 4.0e-51 205.3 121 73.6
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 5.2e-51 204.9 147 64.6
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 5.2e-51 204.9 106 81.1
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 8.9e-51 204.1 104 79.8
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.5e-50 203.4 110 76.4
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.5e-50 203.4 110 76.4
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 2.0e-50 203.0 144 62.5
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 2.6e-50 202.6 147 61.9
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 1.3e-49 200.3 106 77.4
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 8.4e-49 197.6 120 70.8
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.4e-48 196.8 124 70.2
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.4e-48 196.8 91 90.1
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 1.9e-45 186.4 104 75.0
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 6.2e-44 181.4 124 61.3
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 1.7e-41 173.3 104 68.3
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.9e-40 169.9 106 68.9
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.4e-40 169.5 101 73.3
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 5.4e-40 168.3 88 80.7
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 9.6e-37 157.5 76 85.5
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 4.8e-36 155.2 77 83.1
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 2.4e-35 152.9 77 80.5
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 2.9e-33 146.0 81 76.5
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 4.8e-28 128.6 97 57.7
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 6.2e-28 128.3 97 57.7
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.2e-25 119.8 102 58.8
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 8.4e-17 91.3 51 70.6
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 1.2e-07 60.8 41 58.5
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 7.9e-07 58.2 51 51.0
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.0e-06 57.8 35 62.9


User provided reference genes

Program Settings