Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 2.4e-54 215.3 113 100.0
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 8.0e-42 173.7 112 81.2
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 8.8e-41 170.2 108 79.6
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 4.4e-40 167.9 111 77.5
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 3.7e-39 164.9 108 77.8
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 4.8e-39 164.5 108 76.9
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 6.3e-39 164.1 108 77.8
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 8.3e-39 163.7 111 76.6
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 1.1e-38 163.3 111 77.5
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.8e-38 162.5 108 76.9
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.8e-38 162.5 110 75.5
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 3.1e-38 161.8 137 67.2
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.1e-38 161.4 108 75.0
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 5.4e-38 161.0 109 75.2
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 7.0e-38 160.6 108 76.9
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 7.0e-38 160.6 109 75.2
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.2e-37 159.8 110 75.5
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.6e-37 159.5 108 75.9
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 2.0e-37 159.1 106 76.4
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 2.7e-37 158.7 106 75.5
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.5e-37 158.3 108 75.0
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 3.5e-37 158.3 108 75.0
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 4.5e-37 157.9 106 74.5
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 7.7e-37 157.1 114 73.7
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 7.7e-37 157.1 108 75.9
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.0e-36 156.8 106 76.4
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 1.0e-36 156.8 111 75.7
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.0e-36 156.8 109 73.4
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.0e-36 156.8 111 73.0
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.3e-36 156.4 111 73.0
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.3e-36 156.4 111 71.2
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 3.8e-36 154.8 107 75.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 5.0e-36 154.5 98 81.6
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 6.5e-36 154.1 105 75.2
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 8.5e-36 153.7 113 71.7
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 8.5e-36 153.7 108 70.4
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.1e-35 153.3 113 69.9
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.5e-35 152.9 108 74.1
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.5e-35 152.9 106 70.8
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.9e-35 152.5 108 70.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 2.5e-35 152.1 110 70.9
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 4.2e-35 151.4 108 69.4
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 7.2e-35 150.6 111 69.4
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 7.2e-35 150.6 108 70.4
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 1.2e-34 149.8 111 69.4
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.2e-34 149.8 108 67.6
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.2e-34 149.8 111 69.4
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 2.1e-34 149.1 108 70.4
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 2.1e-34 149.1 112 72.3
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.1e-34 149.1 108 70.4
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.1e-34 149.1 108 71.3
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.8e-34 148.7 113 68.1
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 6.1e-34 147.5 109 67.9
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.4e-33 146.4 108 69.4
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 1.4e-33 146.4 108 72.2
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 3.0e-33 145.2 109 69.7
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 3.0e-33 145.2 108 69.4
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 4.0e-33 144.8 113 66.4
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 4.0e-33 144.8 113 65.5
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 4.0e-33 144.8 113 65.5
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 4.0e-33 144.8 108 65.7
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 5.2e-33 144.4 105 74.3
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 6.8e-33 144.1 110 68.2
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 8.8e-33 143.7 108 64.8
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 1.2e-32 143.3 111 66.7
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 2.0e-32 142.5 106 66.0
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 3.4e-32 141.7 112 67.0
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.4e-32 141.7 106 67.9
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 3.4e-32 141.7 103 70.9
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 5.7e-32 141.0 111 67.6
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 5.7e-32 141.0 115 67.8
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.3e-31 139.8 115 66.1
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 2.2e-31 139.0 112 68.8
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.2e-31 139.0 113 67.3
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.8e-31 138.7 108 67.6
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.8e-31 138.7 129 59.7
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 3.7e-31 138.3 116 65.5
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 4.9e-31 137.9 105 64.8
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 4.9e-31 137.9 105 64.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 4.9e-31 137.9 104 70.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 6.3e-31 137.5 115 65.2
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 1.4e-30 136.3 104 70.2
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.4e-30 136.3 109 67.0
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.8e-30 136.0 101 67.3
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.8e-30 136.0 109 66.1
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.8e-30 136.0 114 64.0
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 3.1e-30 135.2 113 64.6
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 4.1e-30 134.8 108 64.8
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 5.4e-30 134.4 111 64.0
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 5.4e-30 134.4 111 64.0
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 5.4e-30 134.4 102 67.6
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 7.0e-30 134.0 103 66.0
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 7.0e-30 134.0 111 63.1
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 7.0e-30 134.0 103 68.0
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 7.0e-30 134.0 114 63.2
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.2e-29 133.3 108 64.8
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 1.2e-29 133.3 113 65.5
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.6e-29 132.9 110 64.5
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.6e-29 132.9 110 62.7
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.7e-29 132.1 111 63.1
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.9e-29 131.0 115 65.2
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.9e-29 131.0 115 65.2
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 7.8e-29 130.6 97 67.0
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.7e-28 129.4 104 62.5
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-28 129.4 115 64.3
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-28 129.4 115 64.3
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 2.3e-28 129.0 103 65.0
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 6.6e-28 127.5 103 64.1
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 8.6e-28 127.1 101 70.3
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.1e-27 126.7 103 63.1
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.1e-27 126.7 103 63.1
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.1e-27 126.7 103 63.1
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.9e-27 125.9 106 58.5
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 3.3e-27 125.2 104 61.5
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 7.3e-27 124.0 117 62.4
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 6.1e-26 120.9 102 62.7
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 3.4e-24 115.2 106 53.8
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 3.4e-24 115.2 102 60.8
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 2.9e-23 112.1 102 58.8
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.0e-21 105.9 103 57.3
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 2.7e-21 105.5 58 87.9
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.3e-20 102.4 87 62.1
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.5e-19 99.0 99 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 2.8e-18 95.5 101 51.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 5.2e-17 91.3 102 46.1
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 2.6e-16 89.0 85 57.6
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.3e-15 86.7 75 60.0
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.9e-15 85.5 99 45.5
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 3.7e-15 85.1 76 60.5
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 4.6e-13 78.2 108 50.0
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.0e-12 77.0 75 57.3
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.1e-11 73.6 72 55.6
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.1e-11 73.6 79 53.2
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 2.1e-10 69.3 78 51.3
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 4.4e-08 61.6 57 54.4
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 8.3e-07 57.4 96 36.5


User provided reference genes

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