Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 5.9e-138 494.2 250 100.0
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.0e-97 360.5 234 78.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.6e-95 353.2 235 75.7
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 4.7e-95 351.7 232 77.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.3e-94 349.4 231 76.6
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 3.1e-94 349.0 232 75.9
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.2e-93 347.1 236 74.6
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 2.0e-93 346.3 235 75.7
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 3.4e-93 345.5 235 73.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 9.9e-93 344.0 234 73.5
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 8.4e-92 340.9 233 75.1
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.9e-91 339.7 233 75.5
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 3.2e-91 339.0 233 74.7
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 4.1e-91 338.6 233 73.8
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.2e-90 337.0 240 70.8
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.6e-90 336.7 238 72.3
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.6e-90 336.7 234 71.8
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.1e-90 336.3 233 72.5
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-90 336.3 234 71.8
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.1e-90 336.3 278 63.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 3.5e-90 335.5 247 70.0
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 6.0e-90 334.7 236 72.0
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.3e-89 332.8 234 71.4
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 5.1e-89 331.6 237 71.7
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 6.6e-89 331.3 236 73.3
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 8.6e-89 330.9 231 72.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.6e-89 330.9 235 71.1
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.5e-88 329.3 236 68.2
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 3.3e-88 328.9 235 72.3
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.3e-88 328.9 241 68.9
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 4.3e-88 328.6 233 71.2
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-87 327.0 236 67.4
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.6e-87 326.6 232 71.1
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-87 326.2 239 69.5
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.1e-87 326.2 298 60.1
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 2.1e-87 326.2 234 69.7
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 3.6e-87 325.5 234 69.2
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 3.6e-87 325.5 237 70.5
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 8.1e-87 324.3 230 73.0
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 8.1e-87 324.3 237 68.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.4e-86 323.6 229 71.6
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 1.8e-86 323.2 234 69.2
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.4e-86 322.8 234 70.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.1e-86 322.4 236 70.8
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.6e-85 319.3 230 70.4
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 4.4e-85 318.5 242 69.0
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 4.4e-85 318.5 236 71.2
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 7.6e-85 317.8 241 69.3
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 7.6e-85 317.8 247 66.4
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.3e-84 317.0 231 68.8
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.3e-84 317.0 237 67.5
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 2.2e-84 316.2 236 70.8
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 2.9e-84 315.8 238 68.1
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.9e-84 315.8 236 70.8
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 2.9e-84 315.8 230 68.7
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 4.9e-84 315.1 230 68.7
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 4.9e-84 315.1 230 68.7
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 4.9e-84 315.1 231 69.7
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 6.4e-84 314.7 234 70.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 6.4e-84 314.7 235 69.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 6.4e-84 314.7 238 69.7
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.4e-83 313.5 230 69.6
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 4.2e-83 312.0 234 70.5
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.2e-82 310.5 237 67.9
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 1.6e-82 310.1 228 70.2
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.5e-82 308.9 236 69.1
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 4.6e-82 308.5 273 60.4
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 6.0e-82 308.1 241 66.8
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.0e-81 307.4 235 67.2
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.3e-81 307.0 232 68.1
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.3e-81 307.0 235 66.4
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.3e-81 306.2 234 68.8
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.0e-81 305.8 250 64.4
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.9e-81 305.4 237 66.7
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 8.7e-81 304.3 175 81.1
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.9e-80 303.1 229 68.6
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.9e-80 303.1 238 65.5
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.6e-79 298.9 230 67.4
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.2e-79 298.1 248 64.9
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 6.2e-79 298.1 187 76.5
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 8.1e-79 297.7 216 70.4
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.8e-78 296.6 247 63.6
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.8e-78 296.6 230 65.2
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.0e-77 293.1 265 61.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.9e-75 286.6 230 62.6
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 9.3e-75 284.3 299 53.5
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 4.6e-74 282.0 206 66.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.5e-72 276.9 230 61.3
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.9e-72 276.6 204 70.1
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.8e-70 270.0 236 58.9
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.2e-66 257.3 233 60.1
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.7e-66 256.1 161 74.5
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 3.5e-66 255.8 179 68.7
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.3e-65 253.8 206 59.2
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 6.7e-65 251.5 243 55.1
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 8.7e-65 251.1 385 42.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 3.3e-64 249.2 248 56.0
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 5.6e-64 248.4 187 69.5
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.8e-61 238.4 197 62.4
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 1.0e-57 227.6 238 53.8
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 6.7e-57 224.9 180 61.1
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.1e-51 207.6 163 68.1
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.3e-44 184.1 185 50.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.5e-43 179.9 138 69.6
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.2e-42 177.6 158 63.9
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.0e-41 174.5 162 60.5
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 9.7e-40 167.9 133 65.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 9.7e-40 167.9 133 65.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 6.3e-39 165.2 165 55.2
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.6e-34 149.4 221 39.4
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 7.4e-32 141.7 163 44.2
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.0e-29 133.7 149 51.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 7.7e-29 131.7 149 51.7
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 6.3e-23 112.1 106 62.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.8e-22 110.5 141 45.4
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 3.5e-21 106.3 80 66.2
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 5.9e-21 105.5 105 61.9
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 3.6e-18 96.3 54 79.6
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 4.8e-15 85.9 111 46.8
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 2.4e-14 83.6 108 49.1
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.9e-13 79.0 85 49.4
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 7.2e-11 72.0 47 70.2


User provided reference genes

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