Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-179 630.9 324 100.0
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.9e-61 238.0 334 42.8
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-31 139.8 279 31.9
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-25 119.8 295 28.8
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-24 117.1 313 26.5
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-24 116.7 312 26.6
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-23 112.8 214 31.3
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-22 109.0 318 26.4
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-22 109.0 288 29.2
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-22 109.0 214 32.2
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-21 107.5 210 32.4
CSS0006402 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-21 106.3 311 25.1
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-20 104.8 210 31.4
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.0e-20 102.8 283 27.9
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-20 102.4 204 31.4
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-19 99.8 240 29.2
CSS0037277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-19 99.8 145 35.2
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-19 99.0 291 26.5
CSS0037039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-18 97.8 339 24.5
CSS0017847 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-18 97.1 199 30.2
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-18 96.7 145 36.6
CSS0022591 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-17 94.4 200 29.0
CSS0026355 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-17 94.0 256 28.5
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-17 94.0 144 36.8
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-17 93.6 345 23.5
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-17 93.2 159 32.7
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-16 91.3 146 34.9
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-16 90.5 154 31.2
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 9.7e-16 88.6 214 32.2
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-15 87.4 158 37.3
CSS0030341 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-15 87.4 201 34.3
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-14 82.8 180 36.7
Atru.chr1.3705 Acer truncatum HOM05D000003 ORTHO05D000004 9.1e-14 82.0 87 47.1
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-13 79.0 313 24.3
CSS0009846 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-12 78.6 137 35.0
Medtr4g005490 Medicago truncatula HOM05D002545 ORTHO05D002335 3.8e-12 76.6 229 26.2
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-11 75.1 157 29.3
Atru.chr8.868 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-11 73.6 81 46.9
CSS0050470 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-11 73.2 47 66.0
CSS0032182 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-11 72.4 93 35.5
MBI01_g01229_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D000004 2.7e-10 70.5 257 24.9
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-10 70.1 122 30.3
ECA240G3265 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.6e-10 70.1 109 34.9
Atru.chr4.2618 Acer truncatum HOM05D000003 ORTHO05D002259 6.1e-10 69.3 181 29.3
Atru.chr6.171 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-10 69.3 127 34.6
PSO674G0014 Papaver somniferum HOM05D000003 ORTHO05D000004 7.9e-10 68.9 135 31.1
CSS0016037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-09 68.2 46 67.4
CSS0008792 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-09 67.0 46 54.3
CSS0017940 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-09 67.0 46 65.2
ECA236G2536 Erigeron canadensis HOM05D000003 ORTHO05D000283 5.1e-09 66.2 117 33.3
MBI15_g17566_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.1e-09 66.2 140 29.3
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-09 65.5 341 22.3
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.8e-09 65.5 120 28.3
CSS0004655 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000004 1.1e-08 65.1 47 55.3
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-08 64.7 184 25.5
MBI16_g36264_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-08 63.5 104 33.7
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.7e-08 62.8 158 29.7
Atru.chr2.1980 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-08 62.4 143 29.4
Atru.chr5.2393 Acer truncatum HOM05D000003 ORTHO05D002259 7.4e-08 62.4 137 32.1
Atru.chr8.876 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.8 136 28.7
MBI14_g37017_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-07 60.1 145 32.4
PSO063G1733 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-07 60.1 159 25.2
TWI31G1085 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.8e-07 59.7 49 53.1
PSO339G4400 Papaver somniferum HOM05D000003 ORTHO05D000004 8.2e-07 58.9 155 29.0
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 1.1e-06 58.5 191 27.2
CSS0048207 Camellia sinensis var. sinensis HOM05D000725 ORTHO05D004053 1.4e-06 58.2 37 70.3
Atru.chr4.2649 Acer truncatum HOM05D000003 ORTHO05D002259 1.8e-06 57.8 90 33.3
PSO478G0014 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 57.8 158 26.6
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.4e-06 57.4 131 22.9
Cpa.g.sc2.104 Carica papaya HOM05D000003 ORTHO05D000004 3.1e-06 57.0 139 25.9
MBI04_g23905_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.1e-06 56.6 61 34.4
QL03p051323 Quercus lobata HOM05D000144 ORTHO05D000004 4.1e-06 56.6 148 27.0
Atru.chr2.1999 Acer truncatum HOM05D000003 ORTHO05D002259 5.3e-06 56.2 218 24.3
CSS0021346 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-06 56.2 127 29.9
Atru.chr1.2846 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 37 54.1
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 7.0e-06 55.8 124 29.8
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 9.1e-06 55.5 94 30.9
Actinidia32263 Actinidia chinensis HOM05D000003 ORTHO05D000004 9.1e-06 55.5 41 48.8
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 9.1e-06 55.5 53 56.6
MBI06_g10160_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.1e-06 55.5 137 26.3


User provided reference genes

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