Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.9e-79 297.4 162 100.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 3.4e-46 188.7 137 70.8
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.2e-45 186.0 136 69.1
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.5e-44 182.6 159 62.9
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 9.4e-44 180.6 138 65.9
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.1e-43 179.5 134 67.9
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.6e-43 178.3 137 66.4
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 7.9e-43 177.6 133 66.2
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.4e-42 176.8 134 64.2
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.3e-42 176.0 132 65.9
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.0e-42 175.6 136 66.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.0e-42 175.6 132 65.9
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 3.9e-42 175.3 137 64.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 5.1e-42 174.9 139 64.0
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.0e-41 172.9 134 66.4
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 3.3e-41 172.2 140 65.0
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.7e-41 171.4 129 65.9
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 5.7e-41 171.4 129 65.9
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 7.4e-41 171.0 130 66.2
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 7.4e-41 171.0 129 66.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 7.4e-41 171.0 146 58.9
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 9.7e-41 170.6 133 63.9
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 9.7e-41 170.6 136 63.2
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.3e-40 170.2 131 65.6
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.7e-40 169.9 129 65.1
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.2e-40 169.5 133 64.7
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 6.3e-40 167.9 128 66.4
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.4e-39 166.0 124 66.1
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 3.1e-39 165.6 121 66.1
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 4.1e-39 165.2 121 66.1
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 4.1e-39 165.2 135 60.0
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.3e-39 164.9 128 61.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.3e-39 164.9 135 61.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.9e-39 164.5 128 61.7
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.2e-38 163.7 121 65.3
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.2e-38 163.7 130 63.8
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.2e-38 163.7 126 65.1
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.5e-38 163.3 150 57.3
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.5e-38 163.3 119 67.2
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.5e-38 163.3 141 58.2
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-38 162.9 128 60.9
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.6e-38 162.5 118 66.9
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 2.6e-38 162.5 127 66.1
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.6e-38 162.5 117 70.1
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.4e-38 162.2 117 70.1
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 4.5e-38 161.8 119 70.6
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 4.5e-38 161.8 119 70.6
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 5.9e-38 161.4 128 60.9
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.9e-38 161.4 126 61.9
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 7.7e-38 161.0 121 66.1
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.3e-37 160.2 118 68.6
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.3e-37 160.2 129 61.2
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.2e-37 159.5 117 67.5
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 2.9e-37 159.1 133 60.9
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.8e-37 158.7 119 66.4
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 3.8e-37 158.7 146 60.3
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 5.0e-37 158.3 146 56.2
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 6.5e-37 157.9 143 57.3
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 8.5e-37 157.5 128 60.9
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.9e-36 156.4 112 68.8
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 3.2e-36 155.6 142 57.0
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 3.2e-36 155.6 138 58.0
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.2e-36 155.6 116 69.0
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.5e-36 154.8 113 68.1
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.2e-35 153.7 117 65.0
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.6e-35 153.3 118 66.1
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.6e-35 153.3 133 60.2
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.1e-35 152.9 121 60.3
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 2.1e-35 152.9 113 67.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.1e-35 152.9 137 59.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-35 152.5 126 60.3
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.7e-35 151.8 113 64.6
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 4.7e-35 151.8 132 59.8
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 3.0e-34 149.1 121 62.8
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.9e-34 148.7 117 66.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.9e-34 148.7 117 68.4
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.6e-33 146.0 114 64.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.4e-33 145.2 129 60.5
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.4e-33 145.2 129 60.5
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.3e-32 143.7 119 61.3
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.3e-32 143.7 114 63.2
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.7e-32 143.3 120 59.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.2e-32 142.9 123 63.4
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 2.8e-32 142.5 117 61.5
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 3.7e-32 142.1 114 65.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 3.7e-32 142.1 112 66.1
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 3.1e-31 139.0 114 64.9
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 3.1e-31 139.0 114 64.9
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 4.1e-31 138.7 124 58.1
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 5.3e-31 138.3 112 65.2
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 7.0e-31 137.9 113 64.6
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 9.1e-31 137.5 112 65.2
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.2e-30 137.1 114 64.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.6e-30 136.7 114 63.2
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 4.5e-30 135.2 125 58.4
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 7.7e-30 134.4 114 62.3
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.3e-29 133.7 114 62.3
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 2.9e-29 132.5 114 61.4
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.9e-28 129.8 112 60.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.4e-26 123.6 147 45.6
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.1e-25 120.6 141 47.5
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 4.8e-24 115.2 122 50.8
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 4.1e-23 112.1 86 67.4
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 7.0e-23 111.3 128 49.2
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.2e-22 110.5 126 46.0
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.2e-22 110.5 137 46.0
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.6e-22 110.2 117 53.0
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.5e-20 101.7 73 71.2
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.3e-16 90.5 72 62.5
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.0e-14 83.2 131 33.6
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 2.2e-13 79.7 118 41.5
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.8e-13 79.0 56 64.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 9.5e-12 74.3 84 51.2
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 3.6e-11 72.4 54 63.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 4.7e-11 72.0 109 36.7


User provided reference genes

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